Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01170 ATGGATACTAAATCTGTCGTAGATTTACTAGAATCATCCTCGGGGGTTCATTTTTCTGGATTTCACATGAATGGTTTAGAGCAAAGGAAGTCTGGCATTGAGCAACCAACGACTTCCGAAGCTGAAGAGATGTCTAAACAACCATTTGTtatagGTGTTGCTGGGGGAGCAGCATCAGGGAAGACTACAGTTTGTGACATGATCATTCAGCAGCTTCACGACCAACGTGTCATACTTGTTAGTCagGAttcattttatcataaattgaCCGAAGAGGAGCTTACAAGAGTACAGGATTACAACTTTGACCATCCTGATGCTTTTGATAATGAGCAATTGTTACATGTTATGGACAAGTTGAGGCATGGCCAAGCAGTAGATATTCCAAACTATGACTTCAAGAGTTACAAGAGCAATATATTTCCAGCAAGGAGGGTAAACCCTTCAGATGTTATAATTTTGGAAGGCATACTTGTGTTCCATGATCCACGTGTTCGGGAGTTGATGAATATGAAGATATTTGTTGACACAGATGCTGATGTTCGTCTGGCGAGGAGGATTAGGCGTGATACTGTTGAGAAGGCTCGGGATATTGGTGCAGTGCTTGATCAGTACTCCAAATTTGTGAAGCCGGCTTTTGATGATTTCATCCTTCCAACTAAAAAGTATGCTGATATCATCATACCCCGTGGAGGTGATAATCATGTAGCCATTGATTTGATTGTACAGCATATCCTCACCAAACTTGGTCAGCACAACCTATGTAAAATATATCCAAATTTATATGTCATTCAATCAACTTTTCAGATACGGGGTATGCATACCCTGATACGTGATTCTCAGACAACGAAGCatgattttgtgttttatGCTGACCGTTTGATTCGTTTGGTTGTTGAACATGGCCTGGGGCATCTGCCATTTACAGAGAAGCAAGTAATCACTCCTACCGGGTCTGTATACACGGGTGTGGACTTTTGTAAGAGATTATGTGGTGTCTCGGTTATCAGGAGTGGGGAGAGTATGGAAAATGCTTTACGAGCATGCTGTAAGGGTATCAAGATTGGAAAAATTCTTATACATAGAGAAGGTGACAATGGCCAGCAGttaatatatgaaaagttGCCGAATGATATCTCTGATAGGCATGTGTTGCTATTGGATCCCATCCTGGGCACAGgTAATTCGGCTGTTCAAGCAATTTCTTTACTTCTAAAAAAGGGTGTGCCAGAGTCCAACATCATATTTCTCAATCTCATATCAGCACCTCAAGGTGTGCACGTGGTGTGCAAGAGATTcccaagaataaaaattgtgaCATCTGAGATTGAAATTGGTTTGAACAAAGATTTTCGAGTCATACCGGGCATGGGTGAGTTTGGGGACCGGTATTTTGGAACAGATGACGACGACCAGCAGGTGGTGACCCCTTCATA 1436 0.4046 MDTKSVVDLLESSSGVHFSGFHMNGLEQRKSGIEQPTTSEAEEMSKQPFVIGVAGGAASGKTTVCDMIIQQLHDQRVILVSQDSFYHKLTEEELTRVQDYNFDHPDAFDNEQLLHVMDKLRHGQAVDIPNYDFKSYKSNIFPARRVNPSDVIILEGILVFHDPRVRELMNMKIFVDTDADVRLARRIRRDTVEKARDIGAVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHILTKLGQHNLCKIYPNLYVIQSTFQIRGMHTLIRDSQTTKHDFVFYADRLIRLVVEHGLGHLPFTEKQVITPTGSVYTGVDFCKRLCGVSVIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPNDISDRHVLLLDPILGTGNSAVQAISLLLKKGVPESNIIFLNLISAPQGVHVVCKRFPRIKIVTSEIEIGLNKDFRVIPGMGEFGDRYFGTDDDDQQVVTPS 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01170 478 Pfam Phosphoribulokinase / Uridine kinase family 50 236 IPR006083 GO:0005524|GO:0016301
Bva12g01170 478 Gene3D - 252 467 IPR029057 -
Bva12g01170 478 TIGRFAM udk: uridine kinase 46 248 IPR000764 -
Bva12g01170 478 PRINTS Uridine kinase signature 48 65 - -
Bva12g01170 478 PRINTS Uridine kinase signature 180 190 - -
Bva12g01170 478 PRINTS Uridine kinase signature 78 89 - -
Bva12g01170 478 PRINTS Uridine kinase signature 123 138 - -
Bva12g01170 478 PRINTS Uridine kinase signature 216 229 - -
Bva12g01170 478 PRINTS Uridine kinase signature 194 205 - -
Bva12g01170 478 PANTHER URIDINE KINASE 16 469 - -
Bva12g01170 478 SUPERFAMILY PRTase-like 251 468 IPR029057 -
Bva12g01170 478 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 241 IPR027417 -
Bva12g01170 478 Gene3D - 44 251 IPR027417 -
Bva12g01170 478 CDD UMPK 50 248 IPR000764 -
Bva12g01170 478 Pfam Uracil phosphoribosyltransferase 266 467 - -
Bva12g01170 478 PANTHER URIDINE KINASE 16 469 - -
Bva12g01170 478 CDD PRTases_typeI 325 440 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01170 Bva-Chr12 11190057 11197357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01170 1 470 PRT Gene Family AT4G26510 83.966 0.0 823
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01170 K00876 - zju:107407445 874.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01170 12 11190057 11197357 Bva12g02581 12 19169368 19175906 BWGD