Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01169 ATGCCACAAGAGAGCATTCCTTTCACGTCTCCTTCGAAGAGTTTGAGAGGATTGACAGAGGAGAGTTTCAATGATCGGGAATTAGCTCAGAGGAAAGCAGATGAGGCTGCTTCAAGAAGGTATCAAGCAGCTGAATGGCTGCGTCAGATGGACCATGTTGCATCAGCTTCACTGCCCAAAGAGTCCTCCGAAGAAGAATTCTGCCATGCCCTGCGCAATGGCCTCATTCTCTGCAATGTCCTCAACAAAGTCAGTCCTGGGGCTGTTCCAAAGGTGGTGGACAATCCTACACTTGCGGTTCAGTATGCAGATGGTGCTGCTCAATCTGCAATTCAGTATTTCGagaatatgagaaattttctGGAGGCCGTAAAGAAGATGACGCTATTGACATTTGAGGCATCAGATATAGAAAAGGGGGGTTCGTCGAGTAAAGTCGTTGACTGCATTCTCTGTCTGAAAGGGTATTATGAATGGAAGCTATCCGGTGGAGTTGGGGTGTGGAAGTATGGTGGAACTGTTAGAATTACTTCCTTCCCCAAGGGGCCTTCCTCCATAAGGGGAAGTGAGAGTACTGATGAATCTCTGGATGAGTCTGAGTCATCGCAATACGAACAGCTACTAGAGTTTCTCTATTTATCTAATGACATCTCagttgaagaaacaaaaactgcCAATGCTCTGGCTTTCCTATTTGATCACTTTGGACTCAGGCTTCTTCAGGTTTACCTTAAAGAGAGCGACGGGATTGAAGATCCGCCTCTGAATTCAATGGTAGTTGATGCTTTGCTCAGCAAGGTAGTCAAGGATTTTTCAGAGTTGCTTGTTTCTCAAGGGACTGAGCTTGGACttttcttgaagaaaatattgaaagatGATATGGGTTGCCTATCAAAGATAGAGTTTATAGAAGCTATCTCTGTATATCTTAACCAAAGAAGTACTTTGGCATCAAAGGATTTCTCCAAATTCTGCGTTTGTGGTGGAAAACGTGATAGTATTCAGCGTAATAACAATTATTCTGCCAATCATgctcaaataattgattctcaACAGAAACAGCTTGAGGTAATGAAATACTTTTGTCAAGAGACAAAGCTGGAGGTGAAACAAATTCAATCAGAGTGGGAGCAAGAAATGAGCAGGCTTGAGCATCATGTCAAGAGTCTTGAAGGGGCCTCCTCTTCCTTCCACAGGGTTTTGGAGGAGAACCGCCTTCTTTATAATCTCGTGCAAGATCTCAAAGGAAGCATTAGGGTCTACTGTAGAGTGAGGCCCTTCTTACCAGGACAATCAAATGGACAGTCTACAGTAGACTATATAGGGGAAAATGGAAACATCATGATCGTCAATCCCCTTAAGCAGGGAAAAGATGCAAGAAGGGTATTTTCATTCAATAAGGTGTTTGGAACAAATGTCACACAAgAACAAATATATGCGGACACTCAACCACTGATCAGGTCTGTCTTAGATGGGTTCAACGCGTGCATCTTTGCATATGGACAGACTGGCTCAGGGAAGACCTACACAATGAGTGGGCCTGATCTGATGGCTGAGGAGACATGGGGAGTAAACTACAGGGCTTTGCGTGACCTATTTCATATATCAAGGGAAAGGTCTGAACTCATAAAATATGAAGTTGGTGTCCAGATGATCGAGATTTACAATGAACAAGTGAGAGACTTATTAGTCATTGATGGCTCCAATAGAAGATATCCTTCAATTCACACTTGCCATATTTCTGTTACATCACgattATATACATTAGATATACGAAACAATTCTCAATTGAATGGCCTTAATGTGCCTGATGCTTGTTTGTTCCCGGTTAACTGTACTCAAGATGTTCTTGATTTAATGAGGATTGGTCAGAAGAACCGTGCTGTTGGTGCTACTGCTCTGAATGAGCGAAGCAGCCGATCTCATAGTGTTTTGACAGTTCATGTCCGAGGAAGAGAGTTAGTTTCTAACACAATTCTTAAGGGTTGTCTCCATCTTGTGGATTTGGCTGGAAGTGAGAGAGTGGATAAATCTGAGGCTGTTGGTGAGAGACTAAAGGAGGCccaacatataaataaatcacttTCTGCACTTGGGGATGTTATCTCTGCTTTGGCACAGAAGAGTTCACATATTCCTTACAGAAACAGCAAGCTCACACAAGTTTTACAAGATTCTTTAGGTGGACATGCAAAAACTTTGATGTTTGTTCACATAAATCCTGAACTTAATGCTCTTGGGGAGACAATTAGCACACTCAAGTTTGCTGAGAGAGTTGCATCCGTTGAACTTGGGGCTGCTCAATCTAACAAAGAAACTGGTGAAATCCAAGAGTTAAAGGAAGAGATATCAAACCTCAAATTGGCTTTGGAGAGGAAGGAAACTGAATTAGAGCAATGGAAATCTGCAAATGCTCGAAACACCACAGAATCTCAAAAACCAAGAGCTGTCTCACCCTTTCGCCTGCCCAAATATGGTACCAATGCCAGCATGAAGCCTGAAAGTTCTCAACAATCTATTGATGATAGAAGCTCTGAGGCTAGAAGTTGTTCTTCAGGAAAGCAAAGAACCAGATTTCCCTCAACAGTCATAGACAAGGACTCCATGCCCAAGACGCCTCTTCCAGCTCAAGAAAAATTAGCAAGCTCAGGGAAAGGGAGATCACCATCACCTCCTATCAGGAGATCACTGTCCACTGATAGAGGGTCTGTGATTAGAAGTAAGGTCAAAACTGATGCAGCAGACAACCAACCAGTTATAAAACATCTGTTTCCAGCTAGAGTACCAGAAAATAAGTCTCTTGCAGCATTGCCAATTGCCCCATCTAGTGAAAATAACTCAAGGGCATATATGAATTCACAAGATCCAGTTAAGCAGGAAAACATTTCTGAAATACTCGTCAGCCTCCAGAAAGTAAACTCCAAAAAAGTTCATCAAGAACGTGAAGAAGAACAATTTAAGCAAGCACTTAGTGCAGTAAGACAAGGTGGtattagaaaaatcaaggctGACGGTAAGACCAAGGCCAAGCATCACCAACAAATGCCCTTTAGAATTCAAAAGTCTGATATGATACCAACATTGATTTCTGATATGGATTTTTCTGGTGAAAGAATATTGGAGGCACCTCCAAAGAGTGATGACTCTGATCCAGAAAACGATCATGGCCTGATTGAGCTCTCATTTCATGCTGCTTTAAACCTTAAGAAGATAGGTCAGAATTTTGCAAGGAATTCCCAGAACCTTGAACCCAGAGGAACAGTGCAAGCAGGAGAACCCTTGTTGGCTTGTAAAGTTGAAAACAAACTTCTGAATGGTTCAGGTCGCAATctcaaggaaggcagcagttCATCCATGCCTGAATTTAAAAGGAGCCGATCTACCCCACGTGGaaaattttttgctttatctTA 3413 0.4079 MPQESIPFTSPSKSLRGLTEESFNDRELAQRKADEAASRRYQAAEWLRQMDHVASASLPKESSEEEFCHALRNGLILCNVLNKVSPGAVPKVVDNPTLAVQYADGAAQSAIQYFENMRNFLEAVKKMTLLTFEASDIEKGGSSSKVVDCILCLKGYYEWKLSGGVGVWKYGGTVRITSFPKGPSSIRGSESTDESLDESESSQYEQLLEFLYLSNDISVEETKTANALAFLFDHFGLRLLQVYLKESDGIEDPPLNSMVVDALLSKVVKDFSELLVSQGTELGLFLKKILKDDMGCLSKIEFIEAISVYLNQRSTLASKDFSKFCVCGGKRDSIQRNNNYSANHAQIIDSQQKQLEVMKYFCQETKLEVKQIQSEWEQEMSRLEHHVKSLEGASSSFHRVLEENRLLYNLVQDLKGSIRVYCRVRPFLPGQSNGQSTVDYIGENGNIMIVNPLKQGKDARRVFSFNKVFGTNVTQEQIYADTQPLIRSVLDGFNACIFAYGQTGSGKTYTMSGPDLMAEETWGVNYRALRDLFHISRERSELIKYEVGVQMIEIYNEQVRDLLVIDGSNRRYPSIHTCHISVTSRLYTLDIRNNSQLNGLNVPDACLFPVNCTQDVLDLMRIGQKNRAVGATALNERSSRSHSVLTVHVRGRELVSNTILKGCLHLVDLAGSERVDKSEAVGERLKEAQHINKSLSALGDVISALAQKSSHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPELNALGETISTLKFAERVASVELGAAQSNKETGEIQELKEEISNLKLALERKETELEQWKSANARNTTESQKPRAVSPFRLPKYGTNASMKPESSQQSIDDRSSEARSCSSGKQRTRFPSTVIDKDSMPKTPLPAQEKLASSGKGRSPSPPIRRSLSTDRGSVIRSKVKTDAADNQPVIKHLFPARVPENKSLAALPIAPSSENNSRAYMNSQDPVKQENISEILVSLQKVNSKKVHQEREEEQFKQALSAVRQGGIRKIKADGKTKAKHHQQMPFRIQKSDMIPTLISDMDFSGERILEAPPKSDDSDPENDHGLIELSFHAALNLKKIGQNFARNSQNLEPRGTVQAGEPLLACKVENKLLNGSGRNLKEGSSSSMPEFKRSRSTPRGKFFALS 1137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01169 1137 MobiDBLite consensus disorder prediction 799 903 - -
Bva12g01169 1137 MobiDBLite consensus disorder prediction 1106 1137 - -
Bva12g01169 1137 ProSiteProfiles Kinesin motor domain profile. 417 762 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva12g01169 1137 Gene3D Kinesin motor domain 412 804 IPR036961 -
Bva12g01169 1137 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 417 799 IPR027417 -
Bva12g01169 1137 MobiDBLite consensus disorder prediction 801 815 - -
Bva12g01169 1137 SMART kinesin_4 415 770 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva12g01169 1137 PANTHER KINESIN-LIKE PROTEIN KLP-3 10 1132 - -
Bva12g01169 1137 SUPERFAMILY Calponin-homology domain, CH-domain 36 178 IPR036872 -
Bva12g01169 1137 MobiDBLite consensus disorder prediction 1 18 - -
Bva12g01169 1137 Coils Coil 769 810 - -
Bva12g01169 1137 PANTHER HEAVY CHAIN, PUTATIVE-RELATED 10 1132 - -
Bva12g01169 1137 MobiDBLite consensus disorder prediction 829 859 - -
Bva12g01169 1137 Coils Coil 373 393 - -
Bva12g01169 1137 MobiDBLite consensus disorder prediction 1108 1124 - -
Bva12g01169 1137 MobiDBLite consensus disorder prediction 1 31 - -
Bva12g01169 1137 SMART ch_5 39 156 IPR001715 GO:0005515
Bva12g01169 1137 Pfam Calponin homology (CH) domain 39 158 IPR001715 GO:0005515
Bva12g01169 1137 ProSiteProfiles Calponin homology (CH) domain profile. 37 158 IPR001715 GO:0005515
Bva12g01169 1137 PRINTS Kinesin heavy chain signature 492 513 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva12g01169 1137 PRINTS Kinesin heavy chain signature 712 733 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva12g01169 1137 PRINTS Kinesin heavy chain signature 663 681 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva12g01169 1137 PRINTS Kinesin heavy chain signature 632 649 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva12g01169 1137 Pfam Kinesin motor domain 423 761 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva12g01169 1137 Gene3D - 29 158 IPR036872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01169 Bva-Chr12 11175681 11183416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01169 408 762 Calmodulin-binding Proteins AT5G65930 40.000 7.93e-71 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01169 K10406 - gmx:100793458 1709.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01169 12 11175681 11183416 Bva12g02582 12 19182304 19190271 BWGD