Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01166 ATGCCTTCAAGCTTAAGGAATCTGACACTTTCTCCCAAAATCTTCTCCTTCATCTTACTTCTTTGGATAAACTCTCTTATCTTTCCATGTTGTTACTCCATTAATGAACAAGGCCAAGCTCTTCTGGCATGGAAGAGCAGCTTGAACGACACAGCAGATGCATTAGCGTCATGGAAGCCTTCAGAACCAAGTCCATGCAGGTGGTTTGGTGTGCACTGCAACTTAGAAGGAGATGTGGAGGAGATAAACGTGAAAGGGCTGGATTTGCAAGGCTCATTgccttcaaattttcaaactctcAAGGCCTTGAAGGTTCTTGTTGTCTCATCAACCAACATCACAGGCACAATCCCAAAAGAAATTGGAGAGTGTCAAGAGCTCATTTTGATTGATCTCAGTGACAATTCTCTTTTTGGTGAAATCCCAGAAGAAATTTGCAGGCTAGAAAAACTGCAGAGTTTATCTCTTCAAACCAACTTCCTTGAAGGCAACATTCCATCAAACATTGGAAACTTATCAAGCCTAGTGAATTTGACGCTCTATGACAACCAGCTCAGTGGTGAAATTCCAAAGAGTATTGGGGCATTAAGCAAGCTCCAAATATTCAGAGCAGGtgggaataaaaatcttaaggGTGACCTGCCATGGGACATTGGAAACTGCACCAACCTGGTTATGTTAGGCCTTGCAGAAACCAGCATTTCTGGGAGTCTTCCTTCATCAATTGGAAAGCTAAAAAGAATACAAACAATAGCCATTTACACTGCTCTATTATCAGGCTTTATCCCAGAAGAGCTTGGGAATTGCAGTGAGCTGCAGAACCTGTACTTGTATCAGAACTCAATCTCAGGTCCAATCCCAAGAACAATTGGAGAGCTCAGAAAGCTTCAGAGTATCCTTCTATGGCAAAACATTATTGTGGGTACCATCCCAGATGAGATTGGTAGCTGCACAGAGCTTAAAGTCATGGACTTATCAGAAAACCTTCTCACAGGTAGCATACCAAGGAATTTTGGGCTGCTTTCAAATCTTCAGGAACTTCAACTTAGTGTTAATCAGTTGTCAGGTATTATACCTCCTGAAATCACAAACTGCACTTCCCTGACTCTGCTTGAATTTGACAACAATGCCATTTCTGGTGAGATTCCTCCGGTTATAGGTAACTTGAAAAGCTTGAATCTGTTCTTTGCTTGGCAGAACAAGCTGACAGGAAAAATCCCAGAAAGCCTCTCTGAGTGCCAGAAACTTGAGGCGCTTGATCTTTCCTATAACAGTTTATCAGGTCCAATACCCAAACAACTATTTGGGTTGAGAAATCTCACGAAACTTTTGCTTCTTTCCAATGATTTATCAGGCTTTATACCACCTGATATAGGCAGCTGCACAAGCCTCTACAGGTTAAGATTCAACTACAACAGATTGGCAGGTAGCATTCCATCTGAGATTGGAagattgaagaatttgaacttCTTGGATTTTAGCAGCAATCATCTTGTAGGGGAAATACCTTCAACACTATCTGGTTGTGAAAAGCTTCAGTTTTTGGATCTTCACTCAAATAGTCTCACAGGTTCTATACCAGAGACTCTGCCTGAAAGCCTTCAGTTCTTAGACTTGTCAAACAACAGGCTAACAGGTGCACTAAGCCATACCATTGGCTCATTAACAGAATTAGCCAAACTCAACCTGGGAAAGAATCAGCTTAATGGAAGAATCCCTTCTGAGATCCTTTCTTGCTCTAAGCTGCAACTTTTAGACTTGGGAAGCAATGTTTTTTCTGGAGAAATTCCCAAGGAAATTGGTCAAATCTCTTCACTAGAAATCTCTCTCAATCTTAGCTGCAACCAATTTTCTGGTGAAATCCCATCTCGGTTCTCTGGCCTTGGCAGACTAGGAGTGCTCGATCTCTCCCACAACAAGCTCTCAGGGAACTTAAACTCTCTCTTAGAGCTTCTAAACCTTGTCTCCTTGAATGTTTCCTTCAATGACTTCTCTGGTGAATTGCCAAACACCCCATTCTTCAGAAAACTCCCTCTCAGTGACCTCACTGCAAATGACGGCCTCTATATCGCCGGTGGTGTTGTTACTCAGGCTGGCAGAATAAGACCCAATGATCATGTCAAATCAGCCATGAAATTCATGATGTCCATTCTCTTAAGCACCAGTGCAGTGCTAGTACTGCTAACAATCTACATCTTGGTTCGAGCTCACAAGTCGAATAGAGCACTCACGGAAAATCACACTTGGGAAGTGACCCTGTATCAGAAGCTTGAGTTCTTCATTGATGACATCGTCAGAAGCTTGACTTCAGCTAATGTCATTGGCACTGGAAGCTCTGGAGTTGTGTACAAGGTGACAATCCCAAGTGGCGAAACACTAGCAGTGAAGAAGATGTGGTCATCAGAAGAATCAGGAGCATTCAGCTCAGAAATTCGAACACTAGGTTCAATCAGACACAAGAACATCATTAGGCTACTGGGCTGGGCATCCAACAGGAGTCTCAAGCTGCTTTTTTATGATTATCTCCCTAATGGAAGCTTGAGCTCACTGCTTCATGGTTCAGGAAAAGGAGGAGCAGAATGGGAAGCTAGATTTGATGTTATTTTAGGTGTGGCGCATGCACTTGCATATCTGCACCATGATTGTGTGCCTGCAATATTGCATGGAGATATCAAAGCCATGAATGTGCTATTGGGTCCTGGAAATCAACCTTACCTTGCTGATTTTGGCCTTGCAAGAATTGCAAATGAGAATACTGATGATGGAACAAATTCCAAGCCAGTTCAAAGACCTTACCTCGCTGGTTCCTATGGCTACATGGCTCCAGAGCATGCGTCAATGCAGAGAATCACTGAGAAGAGTGATATCTACAGTTTTGGTGTGGTTCTTCTTGAGGTTTTGACAGGGAGGCACCCACTTGACCCTGCTTTACCAGGTGGTGCACCCTTGGTTCAGTGGGTTAGGAACCATTTGACTAGTAAAGGAGACCCATATGACATTCTTGACCAAAGGCTGAGGGGAATGGTTGACCCTACTATGCATGAAGTGCTGCAAACTCTTGCCGTATCATTTCTCTGTCTCAGCACCAGAGCTGAAGAGCGCCCGACAATGAAGGATGTGGTTGCAATGCTCAAGGAAATCAGACCTGATGAGGCCTCAAGAGCAGACCCTCAGTTTCTCAAGGGAGGTTTAGAAGCACATGTCTCTCCACCACCACCTAAGAATCTAGCTTCAAATGGTTCATCTAACTGCTCCTTCAATTTCTCATCAGATCACTCAATCTGCTG 3287 0.4274 MPSSLRNLTLSPKIFSFILLLWINSLIFPCCYSINEQGQALLAWKSSLNDTADALASWKPSEPSPCRWFGVHCNLEGDVEEINVKGLDLQGSLPSNFQTLKALKVLVVSSTNITGTIPKEIGECQELILIDLSDNSLFGEIPEEICRLEKLQSLSLQTNFLEGNIPSNIGNLSSLVNLTLYDNQLSGEIPKSIGALSKLQIFRAGGNKNLKGDLPWDIGNCTNLVMLGLAETSISGSLPSSIGKLKRIQTIAIYTALLSGFIPEELGNCSELQNLYLYQNSISGPIPRTIGELRKLQSILLWQNIIVGTIPDEIGSCTELKVMDLSENLLTGSIPRNFGLLSNLQELQLSVNQLSGIIPPEITNCTSLTLLEFDNNAISGEIPPVIGNLKSLNLFFAWQNKLTGKIPESLSECQKLEALDLSYNSLSGPIPKQLFGLRNLTKLLLLSNDLSGFIPPDIGSCTSLYRLRFNYNRLAGSIPSEIGRLKNLNFLDFSSNHLVGEIPSTLSGCEKLQFLDLHSNSLTGSIPETLPESLQFLDLSNNRLTGALSHTIGSLTELAKLNLGKNQLNGRIPSEILSCSKLQLLDLGSNVFSGEIPKEIGQISSLEISLNLSCNQFSGEIPSRFSGLGRLGVLDLSHNKLSGNLNSLLELLNLVSLNVSFNDFSGELPNTPFFRKLPLSDLTANDGLYIAGGVVTQAGRIRPNDHVKSAMKFMMSILLSTSAVLVLLTIYILVRAHKSNRALTENHTWEVTLYQKLEFFIDDIVRSLTSANVIGTGSSGVVYKVTIPSGETLAVKKMWSSEESGAFSSEIRTLGSIRHKNIIRLLGWASNRSLKLLFYDYLPNGSLSSLLHGSGKGGAEWEARFDVILGVAHALAYLHHDCVPAILHGDIKAMNVLLGPGNQPYLADFGLARIANENTDDGTNSKPVQRPYLAGSYGYMAPEHASMQRITEKSDIYSFGVVLLEVLTGRHPLDPALPGGAPLVQWVRNHLTSKGDPYDILDQRLRGMVDPTMHEVLQTLAVSFLCLSTRAEERPTMKDVVAMLKEIRPDEASRADPQFLKGGLEAHVSPPPPKNLASNGSSNCSFNFSSDHSIC 1095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01166 1095 Gene3D Ribonuclease Inhibitor 431 693 IPR032675 -
Bva12g01166 1095 Gene3D Ribonuclease Inhibitor 335 430 IPR032675 -
Bva12g01166 1095 ProSitePatterns Serine/Threonine protein kinases active-site signature. 886 898 IPR008271 GO:0004672|GO:0006468
Bva12g01166 1095 SMART LRR_typ_2 172 196 IPR003591 -
Bva12g01166 1095 SMART LRR_typ_2 485 509 IPR003591 -
Bva12g01166 1095 SMART LRR_typ_2 341 365 IPR003591 -
Bva12g01166 1095 SMART LRR_typ_2 532 554 IPR003591 -
Bva12g01166 1095 SMART LRR_typ_2 555 579 IPR003591 -
Bva12g01166 1095 SMART LRR_typ_2 628 651 IPR003591 -
Bva12g01166 1095 SMART LRR_typ_2 100 124 IPR003591 -
Bva12g01166 1095 SMART LRR_typ_2 437 461 IPR003591 -
Bva12g01166 1095 SUPERFAMILY RNI-like 286 593 - -
Bva12g01166 1095 PRINTS Leucine-rich repeat signature 534 547 - -
Bva12g01166 1095 PRINTS Leucine-rich repeat signature 628 641 - -
Bva12g01166 1095 SUPERFAMILY RNI-like 82 379 - -
Bva12g01166 1095 Gene3D Transferase(Phosphotransferase) domain 1 842 1060 - -
Bva12g01166 1095 Gene3D Phosphorylase Kinase; domain 1 733 841 - -
Bva12g01166 1095 SUPERFAMILY Protein kinase-like (PK-like) 755 1044 IPR011009 -
Bva12g01166 1095 Gene3D Ribonuclease Inhibitor 33 208 IPR032675 -
Bva12g01166 1095 ProSiteProfiles Leucine-rich repeat profile. 630 652 IPR001611 GO:0005515
Bva12g01166 1095 MobiDBLite consensus disorder prediction 1062 1081 - -
Bva12g01166 1095 Gene3D Ribonuclease Inhibitor 227 334 IPR032675 -
Bva12g01166 1095 ProSitePatterns Protein kinases ATP-binding region signature. 774 797 IPR017441 GO:0005524
Bva12g01166 1095 SUPERFAMILY L domain-like 571 669 - -
Bva12g01166 1095 Pfam Leucine rich repeat N-terminal domain 35 74 IPR013210 -
Bva12g01166 1095 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 4 1057 - -
Bva12g01166 1095 Pfam Protein kinase domain 771 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g01166 1095 Pfam Leucine rich repeat 294 354 IPR001611 GO:0005515
Bva12g01166 1095 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 4 1057 - -
Bva12g01166 1095 ProSiteProfiles Protein kinase domain profile. 768 1059 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g01166 1095 SMART serkin_6 768 1044 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01166 Bva-Chr12 11165613 11169365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01166 31 1091 Receptor kinase-like Gene Family AT5G56040 67.288 0.0 1425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva12g01166 Pkinase 2.8e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01166 - - gmx:100802880 1656.34