Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01159 ATGGAAATTGGAAGGGAGGATGAGATTGAGGACATGTCGGTGTCAGTGACAGTGTCACCCCCATCAATGGGTTCTATGCAGATAGCAGGCAACAATGGAGTTCATGTCTCAAGCCACAACATGGAGTTCATATCTCAAGCATATCTCCAGAACATGTACTCAGGGATTGGCATTCAAGTTGAGGATTCTCACGCCAACCCAGATCGCCCCCTTCCCATATTTCTCAAGTTTGAAGATGTGGAGTATAAGGTGAGAAATAGTCATAGACCTTCCAATAACTCTGTGAGGACAATGGTGTCAAGATTAGCCACACAACCCAGTGTGGAACAAGACAGGTACAAGAAAATCTTGAAGGGCATCACAGGAAACATTGGCCCGGGTGAAATTCTTGCTCTGATGGGTCCTTCTGGAAGTGGGAAGACAACCTTGTTGAAAGTCATAGGAGGAAGATTACTTGAGAATGTCAAGGGGAAAATAACTTACAATGATGTTAAGTTTAATGCTGCTGTCAAGAGGAGGATTGGATTTGTGACCCAAGAGGATGTGCTTTTCCCACAATTAACAGTCGAAGAAACCTTGGTTTTTTCTGCATTCTTAAGGTTGCCAGCCAACATGAGTCAACAACAGAAATATGCAAGAGTGGAGACAACTATGATGGAGCTAGGCCTAGAAAGATGTCGCCACACAAAGATCAAAGGCATATCAGGaggagaaaggaagagaacCAGCATAGGCTATGAAATTCTCGTTGATCCTTCACTGCTGCTACTTGATGAACCAACTTCAGGCCTTGATTCCACCTCGGCGAACAGACTCCTTGTAACTCTTCAGGGACTTGCAACGACTGGAAGAACAATAATCACGACGATTCACCAGCCATCCAGCAAAATCTTTCACATGTTTGACAAGCTTCTTTTGATAGCAGAAGGCTATCCAGTTTACTATGGAAAAGCTGAAGAATCAATGGAGTACTTTTCATCGTTGAGGTTCATCCCAGAAATACCAATGAATCCTGCAGAATTCTTGCTTGATTTGGCAACCGGGCAAATGAATGGTATAAGTGTTCCAGAAGATATCATGAAGGATCAAGAATCTGCTGACGCTTCAAAAGCTGTTATCAAATATCTCCAACTCAAGTACAAAAGTTTATTGGagccaaaagagaaagaagagaatcaTGGAACAATAACGGCACCAGCACATCTGCAACTAGCCATTCAAGTCAAGAGGGAGTGGACATTGAGTTGGCTGAGCCAATTCATGATTCTATATAAGAGAACATTCAGAGCAAGATGCAAGGACTATTTTGATAAGCTAAGACTAGTTCAAGCAATTGGAATTGCACTCTTGTTGGGGCTTCTTTGGTGGAAATCTTCAACCAACACTGAGGCTCAACTAAGAGATCAGGTTGGCTTAATGTTCTATATCTGTATATTCTGGACATCTTCATGTATATTTGGAGCAGTATATGTGTTTCCATTTGAAGAGGTATACTTggtgaaggaaagaaaagcagaCATGTACAGATTAAGTGTATACTATGGAGCAGGAGAACTATTTGGAGCTGCAGTTATGAGTATTCAAAGAGCAGGGATGGCAGCTTCTTTGATTCTAATGTTGTTTCTTCTTACTGGTGGCTACTATGTTCAACACATACCAAAATTCATGCAGTGGTTGAAGTATCTGTCATTCTTGTATTATGGGTTCAGACTTCTGCTGAAAGTGCAGTATTCAGGAGACCAATCGTATGAGTGTGAAAGCATAGGGGGGTGTCGTCCTTTGCAGAGTTCACCTTCATTTGACACTGTGAACTTGAAAGGAGGCTTGAAAGAAGTGTGGGTTCTGCTGGCCATGGCTCTGTGCTTTCGCTTATTAGCTTATTTTTGCCTTCGTAGACGAATTGATGCCGTCAATGCTTA 1919 0.4085 MEIGREDEIEDMSVSVTVSPPSMGSMQIAGNNGVHVSSHNMEFISQAYLQNMYSGIGIQVEDSHANPDRPLPIFLKFEDVEYKVRNSHRPSNNSVRTMVSRLATQPSVEQDRYKKILKGITGNIGPGEILALMGPSGSGKTTLLKVIGGRLLENVKGKITYNDVKFNAAVKRRIGFVTQEDVLFPQLTVEETLVFSAFLRLPANMSQQQKYARVETTMMELGLERCRHTKIKGISGGERKRTSIGYEILVDPSLLLLDEPTSGLDSTSANRLLVTLQGLATTGRTIITTIHQPSSKIFHMFDKLLLIAEGYPVYYGKAEESMEYFSSLRFIPEIPMNPAEFLLDLATGQMNGISVPEDIMKDQESADASKAVIKYLQLKYKSLLEPKEKEENHGTITAPAHLQLAIQVKREWTLSWLSQFMILYKRTFRARCKDYFDKLRLVQAIGIALLLGLLWWKSSTNTEAQLRDQVGLMFYICIFWTSSCIFGAVYVFPFEEVYLVKERKADMYRLSVYYGAGELFGAAVMSIQRAGMAASLILMLFLLTGGYYVQHIPKFMQWLKYLSFLYYGFRLLLKVQYSGDQSYECESIGGCRPLQSSPSFDTVNLKGGLKEVWVLLAMALCFRLLAYFCLRRRIDAVNA 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01159 639 SMART AAA_5 126 319 IPR003593 -
Bva12g01159 639 Pfam ABC-2 type transporter 291 351 IPR043926 GO:0140359
Bva12g01159 639 Gene3D - 104 331 IPR027417 -
Bva12g01159 639 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 114 327 IPR027417 -
Bva12g01159 639 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 515 634 - -
Bva12g01159 639 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 6 515 - -
Bva12g01159 639 Pfam ABC-2 type transporter 517 577 IPR013525 GO:0016020|GO:0140359
Bva12g01159 639 Pfam ABC-2 type transporter 419 515 IPR013525 GO:0016020|GO:0140359
Bva12g01159 639 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 75 334 IPR003439 GO:0005524
Bva12g01159 639 PANTHER ABC TRANSPORTER G FAMILY MEMBER 26 515 634 - -
Bva12g01159 639 PANTHER ABC TRANSPORTER G FAMILY MEMBER 26 6 515 - -
Bva12g01159 639 Pfam ABC transporter 117 262 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01159 Bva-Chr12 11122132 11125077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01159 115 295 Calmodulin-binding Proteins AT2G36910 28.643 3.65e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01159 K05681 - gmx:100815259 1019.99