Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01138 ATGCGTCCAAGAAAGGGCTTCATTATCATCCTCTTTTTCTTCGCAAGCTTTGGCTTCTTGGACCCAGTTGTGCTCGCAGAGAACACGAGCTTCGAATTCCCTTCTTTCAATTTCCGGAACATCTCTCTTCTGGGCGATTCCTACCTCAGGAATGGTGTTATTGGCCTCACCAGATCCGTCGACGTGCCCACTTCCAGCGCAGGGTCCATAATTTACAATAACCCCATCACTTTCTTCGACCCAGAAACCAATATCACAGCTTCCTTCTCCACCAAGTTCGCATTCTCCATTAACAACGTGAATCCCAGCTCGTTTGGTGATGGGTTGACGTTCTTTATCTCTCCCAGTAACCAGACTCTCGGATCCCCAGGTGGGTATCTGGGTCTCGTCAATTCCTCCCAATTAACCAGCAACAAGTTCGTAGCGGTTGAATTCGACACCCGAATGGATTCTCACTTAAACGACCCGAGTGAGAACCATGTCGGGTTGGATATCGATAGCATGAACTCGATCAAGACCGCGGAGCCGATCGTGCAGGGGATTGATCTCAAAAGTGGGAACTTTATCACTGCTTGGATTGATTACAAGAACGAGCAAGGCAAGCTGATGGTTTTCTTGAGTTATTACAGTTTGAAGCCTGAGAAGCCGACTCTCAGCGTTGATATTAGCCTCTCCAATTATTTGAAGGGGATAATGTATGTGGGTTTTTCAGCTTCTACCGAGGGAAGCACTGAACTTCACCAAATTCAGAATTGGAGCTTTCAGACTTCTGGGTTTCTTGCCCCAAGACCAAACTTGCAGCCCCATAATGTCTCCGATAACTCGGTGACTGCTGTAGGGGTGGACATTCCGAAAACGGGTTCAAGCAAGAAGCATGAAAAAAAGCTTGGATTAGGTGTTGCCATTGCTGGTcctgcatttttctttgttgtccTTTCTGTTTTGGTCTATGTTTCTGTGAAGAAATTGAGGGATGTCAGAAGGCAGAAGATTTTCAGAACAGATTTTGTGGCTTGTCCAAGGGAATACAATTACAAGGAATTGAAATTAGCCACAAAAGGTTTTCATCCCAGTAGAATAATAGGCCATGGATCATTTGGGACAGTTTACAAAGCTTTCTTCATATCTACAGGGACCATTGCTGCAGTAAAAAGGTCAAGGCACTCCCATGACGGAAAAACAGAATTTCTTGCTGAACTATCCATTATTGCTGGCTTGAGGCACAAGAATTTGGTTCAGCTCCAAGGTTGGTGTGTTGAGAAGGGCGAGTTATTACTCGTGTATGAATTTATGCCCAATGGGAGCTTAGATAAGATGCTTTACCTTGAACCTGAACGTGGGCACTTGCTGAATTGGTCACATAGAGTCAATATTGCTATTGGATTAGCTTCTGTTCTAAGTTATCTGCACCAAGAATGTGAGCAGATAGTCATTCACAGAGACATAAAGGCTGGAAATATATTGCTGGATGGTAACTTTAACCCAAGGCTTGGGGATTTTGGATTGGCAAAGCTCATGGATCATGACAAGAGCCCGGTTTCGACATTAACTGCAGGAACAATGGGATACCTTGCTCCTGAGTATCTTCAGTATGGAAAGGCAACTGAGAAGACTGATGTTTTCAGCTATGGAGTAGTTGTGCTTGAAGTGGCTTGTGGGAGAAGGCCaatagaaagagaaggaacAAAAATGGTTAACTTGGTTGATTGGGTCTGGGGGCTGCACTCTCAAGGGAAGATCATTGAAGCAGCTGACAAAAGGTTGAAGGAGGAGTTTATAGAGGAAGAGATGAAGAAGCTGTTACTATTGGGGTTGAGCTGTGCAAACCCAGACAGTGCAGACAGGCCATCAATGAGAAGAGTCCTGCAGATTCTCAACAACGAAGCAGCATGTCTTCCTGTGCCAAAGCTGAAGCCTAGCCTCATATTCTCTTGTAGCCTGCCTTTGAGTATTGATGAGATTGTTTCAGACGGCGAAGAAGACAACAAACGCAACTCTATGTGtgagataaaaattgtttcaGATAGTGAAGAGTCCAATACTAGCCATTCCATGTGTGTGGATAAAGATTA 2072 0.4363 MRPRKGFIIILFFFASFGFLDPVVLAENTSFEFPSFNFRNISLLGDSYLRNGVIGLTRSVDVPTSSAGSIIYNNPITFFDPETNITASFSTKFAFSINNVNPSSFGDGLTFFISPSNQTLGSPGGYLGLVNSSQLTSNKFVAVEFDTRMDSHLNDPSENHVGLDIDSMNSIKTAEPIVQGIDLKSGNFITAWIDYKNEQGKLMVFLSYYSLKPEKPTLSVDISLSNYLKGIMYVGFSASTEGSTELHQIQNWSFQTSGFLAPRPNLQPHNVSDNSVTAVGVDIPKTGSSKKHEKKLGLGVAIAGPAFFFVVLSVLVYVSVKKLRDVRRQKIFRTDFVACPREYNYKELKLATKGFHPSRIIGHGSFGTVYKAFFISTGTIAAVKRSRHSHDGKTEFLAELSIIAGLRHKNLVQLQGWCVEKGELLLVYEFMPNGSLDKMLYLEPERGHLLNWSHRVNIAIGLASVLSYLHQECEQIVIHRDIKAGNILLDGNFNPRLGDFGLAKLMDHDKSPVSTLTAGTMGYLAPEYLQYGKATEKTDVFSYGVVVLEVACGRRPIEREGTKMVNLVDWVWGLHSQGKIIEAADKRLKEEFIEEEMKKLLLLGLSCANPDSADRPSMRRVLQILNNEAACLPVPKLKPSLIFSCSLPLSIDEIVSDGEEDNKRNSMCEIKIVSDSEESNTSHSMCVDKD 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01138 690 CDD lectin_legume_LecRK_Arcelin_ConA 29 258 IPR001220 GO:0030246
Bva12g01138 690 PANTHER - 23 646 - -
Bva12g01138 690 Gene3D Phosphorylase Kinase; domain 1 316 430 - -
Bva12g01138 690 ProSitePatterns Protein kinases ATP-binding region signature. 361 384 IPR017441 GO:0005524
Bva12g01138 690 SMART serkin_6 355 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g01138 690 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 23 646 - -
Bva12g01138 690 Pfam Protein kinase domain 356 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g01138 690 ProSiteProfiles Protein kinase domain profile. 355 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g01138 690 Pfam Legume lectin domain 29 263 IPR001220 GO:0030246
Bva12g01138 690 Gene3D - 26 266 - -
Bva12g01138 690 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 262 IPR013320 -
Bva12g01138 690 SUPERFAMILY Protein kinase-like (PK-like) 339 646 IPR011009 -
Bva12g01138 690 CDD STKc_IRAK 361 627 - -
Bva12g01138 690 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Bva12g01138 690 ProSitePatterns Legume lectins beta-chain signature. 141 147 IPR019825 -
Bva12g01138 690 Gene3D Transferase(Phosphotransferase) domain 1 431 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01138 Bva-Chr12 11021728 11023800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01138 4 660 Receptor kinase-like Gene Family AT5G55830 63.447 0.0 845
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Bva12g01138 Pkinase 9.6e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01138 - - pper:18773109 980.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01138 12 11021728 11023800 Bva12g02614 12 19331254 19333670 BWGD