Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01137 ATGGAGCAAGGAAGGCTATTCAATGTTGTTCGAAGGATCATTCAAAATGCAAATCCCGCCCCAAACGATGTTGTTGAATATGCAGGTGCTGAGCAACGCGTGCAACTGCCTGCTTTCTCAGACACATATCTGCCGGCGGCTAATGTGGTCAGGATTATGAGACAGATTCTTCCTCCTTACGCCAAAATCGCCGATGACTCGAAGGAGATTTTTCAACTGTGTCTCACCGAGTACATTGGCTTCATTACCAGCGAAGCCAACGACGTCTGTAGAAAAGACAAGAGGAAGACGTTAACGGCGGATGATACGTTGGCGGCGATGGTCAACCTCGGCTTCGATGATTATGTCGGACCTCTCACCCGGTACCTTGAACGTTACCGTAGCCTCACTAAAGGCTCTTCTTCTTCGGCTGGGGAGAGCTCTGCTGCGAACAAAAGCGCTGCTGATCTTGGGCCTACAATTGAGCCGCTGCCGGCCCATGTTGCCCCTGGCTTTGGCCCTATAGCTGAGCTGCCACCCACCCCTTCGGCCTTTAACTATGGGCCCTCCTTTGCCCTAGGCCCAAATATGCGTGTTGGGTTTTCTGACCCAATGGATATGGGTTGGTTCTATCAAGGTGGGTCAAGCTCCGGGGGTGCTGGCCCTTCTGGCGGATCTTCCTCTCAGGGTCAGGATGAGTTCGCTGAATCTGATTTGATGGCATACCTTGGAAACTTAGGCAACCAGTA 728 0.5206 MEQGRLFNVVRRIIQNANPAPNDVVEYAGAEQRVQLPAFSDTYLPAANVVRIMRQILPPYAKIADDSKEIFQLCLTEYIGFITSEANDVCRKDKRKTLTADDTLAAMVNLGFDDYVGPLTRYLERYRSLTKGSSSSAGESSAANKSAADLGPTIEPLPAHVAPGFGPIAELPPTPSAFNYGPSFALGPNMRVGFSDPMDMGWFYQGGSSSGGAGPSGGSSSQGQDEFAESDLMAYLGNLGNQ 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01137 242 MobiDBLite consensus disorder prediction 131 150 - -
Bva12g01137 242 MobiDBLite consensus disorder prediction 206 242 - -
Bva12g01137 242 Gene3D Histone, subunit A 38 156 IPR009072 GO:0046982
Bva12g01137 242 MobiDBLite consensus disorder prediction 209 227 - -
Bva12g01137 242 SUPERFAMILY Histone-fold 41 160 IPR009072 GO:0046982
Bva12g01137 242 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 30 169 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bva12g01137 242 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 43 107 IPR003958 -
Bva12g01137 242 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-6 30 169 - -
Bva12g01137 242 MobiDBLite consensus disorder prediction 131 147 - -
Bva12g01137 242 PRINTS CCAAT-binding transcription factor subunit A signature 90 108 - -
Bva12g01137 242 PRINTS CCAAT-binding transcription factor subunit A signature 71 89 - -
Bva12g01137 242 PRINTS CCAAT-binding transcription factor subunit A signature 109 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01137 Bva-Chr12 11017281 11019107 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01137 41 144 CCAAT-HAP3 Transcription Factor Family AT5G47670 59.434 3.27e-40 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Bva12g01137 CBFD_NFYB_HMF 9e-19 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01137 K08065 - pvy:116145007 142.51