Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01117 ATGACTGTAAATGATCGCAGTTTCGTGGAATGGAAAGAGCAGTTTATTTCACAGGAGCGTGGCAATCGTGTGGTCCACTATTACCTGAAGGATTCTGCTGGGGAATCCATCCTTGCAGTTGTGGGTACTGAAAGGAGTGTTAGACACATGTTCTATGTAGTTGCTGATGAATTTGTGGAAGTTTATGCGAAGGAGTGTTCCATTCATGCGGGTTTCAAATGGAGGTCTAGAAGAGAGGTGGTGGATTGGCTGACATCAATGCTATCAAAGCAACACCAGCAGGGAGAAAGAAAtgtgtcatcaaatgaaaatttggcaCAAGTTCATGAGAACGCAGATAGAGATAGTGGCATCAATCAAATCAATGCACTGCATGCTCAAATAGCTGATGAAAAGCTTTTTTCTCAGGGCCTTCTaatgagtagcttcaaaggaCTCAATTCAGATATTGTTTGGTCAGGAGTTGCATGGACGTGTGGCAAACGACTTAAACATTATCCATCTTTTTGCAGGAATGGGATCAAAATAGTGATTCAGTCCTTTGTTTTTGTCATGGGAAAGGGAGAGAATCGTTACGTTGCTTATTTGGAGGATATGTATGAAGACAGGAGGGGTCAGAAAAAGGTTAAAGTGAGGTGGTTTCACCATAATCAAGAAGTCAAGGGTGTAATTCCTGTACGAAACCCTCATCCTCGTGAAGTTTTTATTACACCTTATTCTCAGGTTATTAGTGCAGAGTGCATTGATGGTTCGACCGCAGTCTTAACTCGTGAACATTATGAAAAATGCTTGCCTGCTTTTCCGCCTGCCTCATCGGACAAAATACATTTGTGCAATAGACAATTCAGAAGCAACAAAGTGAAGGACTTTGACTTGAGTAAACTGCGGGGCTACTTTGATCAACCAATCCTCTCTTGCTTGCATTGTGATTTCTTCCAAAATCCTGAGTCCAAGTCTAATAGTCTCATTgtggaagaagatgaagagttGAGTGCAGGTAATGATGCAAGGGTGGGAATGAAGAGGACCAGAACTGATCAGGGGTCTCCGCAGTCTTTAATAGATCACCAAggatataagaaattatttagaaGTCAAGAAATGATGGTGCACAAAACCTTTGAGAATGTAAATTATGCACGGCCAGACAGGAGATTGCTTTCTGTGAAACGGGTTGAGTTTCATCCCTGGTATAACCACATATACAAGGTTGATGACAAGATAGAGTTGCTCTGTCAAGACAGTGGCATCAGAGGATGCTGGTTCAGGTGTACTATTGTTCAGGTGTCATGGAAACAGATGAAAGTCCGATATGATGATGTGCAGGATGAAGATGGGAGCAGCAATCTTGAGGAATGGATCCGTGCTTTCAGACTGGCAATGCCTGATAAACTTGGGATGAGACATTCTGGCCGGCCCACCATCAGACCAGCCCCTTCTTATGAGAAGCAAGAACTGGCAATTGAAGTTGGAACTGCAGTTGATGCATGGTGGAGTGATGGCTGGTGGGAGGGAATTGTAAGTCGAATTGCCAACTGTAGTGATGACAACGTGCAAGTTTACTTTCCTGGTGAAGGCTTGCTAATGAAACTAGCCATGAAGGATCTTAGAAAGTCTAGAGATTGGTTGGGTGATAGGTGGGTGGATATTAAGGCAAAGCCTGATATAGTCTCGACCATTGTTGTAGTAAATAGTTCTAAAGCCAAGCTTTCCACGTCCCCTTCTAAAGATGTTGACTCTGTTGAAGTTCCTATTGTCAATGGTTCTAATGAGCCAGACACTGTTGACGAGAAACCTGTGTCTCCTGTGTGCTGTGCTCGAGATGTAGATTTAATCCGCGATAACAAGCCCCCTTCACAAAAAGAGAATGATACTCAAGATGACAATATTGAGATCCATGGTAGCTGTGGTAttgaaaaaaatcatgatGACGCTAATGATAAGGAAAGCTTGGATGATGATATTGACAAAGATGATAATAATGAAGATAAGGCTATTGAGGTATTTGAGACTTCTGGGCAAGGCTGTAAATCTGTAGAGCTCATGCAAGTGACtgtata 2060 0.4078 MTVNDRSFVEWKEQFISQERGNRVVHYYLKDSAGESILAVVGTERSVRHMFYVVADEFVEVYAKECSIHAGFKWRSRREVVDWLTSMLSKQHQQGERNVSSNENLAQVHENADRDSGINQINALHAQIADEKLFSQGLLMSSFKGLNSDIVWSGVAWTCGKRLKHYPSFCRNGIKIVIQSFVFVMGKGENRYVAYLEDMYEDRRGQKKVKVRWFHHNQEVKGVIPVRNPHPREVFITPYSQVISAECIDGSTAVLTREHYEKCLPAFPPASSDKIHLCNRQFRSNKVKDFDLSKLRGYFDQPILSCLHCDFFQNPESKSNSLIVEEDEELSAGNDARVGMKRTRTDQGSPQSLIDHQGYKKLFRSQEMMVHKTFENVNYARPDRRLLSVKRVEFHPWYNHIYKVDDKIELLCQDSGIRGCWFRCTIVQVSWKQMKVRYDDVQDEDGSSNLEEWIRAFRLAMPDKLGMRHSGRPTIRPAPSYEKQELAIEVGTAVDAWWSDGWWEGIVSRIANCSDDNVQVYFPGEGLLMKLAMKDLRKSRDWLGDRWVDIKAKPDIVSTIVVVNSSKAKLSTSPSKDVDSVEVPIVNGSNEPDTVDEKPVSPVCCARDVDLIRDNKPPSQKENDTQDDNIEIHGSCGIEKNHDDANDKESLDDDIDKDDNNEDKAIEVFETSGQGCKSVELMQVTV 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01117 686 Pfam Agenet domain 405 479 IPR008395 -
Bva12g01117 686 SMART BAH_4 174 291 IPR001025 GO:0003682
Bva12g01117 686 SMART agenet_At_2 486 544 IPR014002 -
Bva12g01117 686 SMART agenet_At_2 400 466 IPR014002 -
Bva12g01117 686 ProSiteProfiles BAH domain profile. 174 293 IPR001025 GO:0003682
Bva12g01117 686 Pfam BAH domain 181 286 IPR001025 GO:0003682
Bva12g01117 686 Gene3D - 144 311 IPR043151 -
Bva12g01117 686 MobiDBLite consensus disorder prediction 613 663 - -
Bva12g01117 686 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 4 664 - -
Bva12g01117 686 PANTHER OS07G0607300 PROTEIN 4 664 - -
Bva12g01117 686 MobiDBLite consensus disorder prediction 613 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01117 Bva-Chr12 10934128 10938764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01117 414 542 PHD Transcription Factor Family AT5G58610 28.571 1.65e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01117 - - gsj:114395106 920.228