Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01115 ATGGAAGTTTTGGTTTTTGGAGTTCAACTTCTGGTCTTGTTTGTTTCAGTTTTTTTCATGTGGGTTGAGGTGGATTTAGCAGAGGGTGGCAATGTCCGTGTCAATGCCGGAAAATATATCAGTTGGGATGATTTGAAGGTGGATGAGCGTAGATTGAGATTGAACTCTAACAATGAAGATAGAGTTATTGTGGTTGATCAGCATGGCAGAGGACATTCAAGAACTGTTCAAGGAGCTGTGGATATGGTTCCAGAacacaacaaagaaagagtgaAAGTTTACATTTACCCAGGAATTTACAGAGAGAAGGTGTTTGTGCCAAAGAGCAAGCCATATGTCTCATTAATagggaaaataaatgaaacagcAGAAGTAGTTATCACTTGGAATAGCAAGGCTTCAGATAAAAGCTCAAGTGGCCAAGAATTGGGAACTTTTGGTTCAGCAACTGTAGGAGTAGATTCTGATTATTTCTGTGCAGCTGAGATTACTTTTCAGGCAAGAAAAGGATA 512 0.3672 MEVLVFGVQLLVLFVSVFFMWVEVDLAEGGNVRVNAGKYISWDDLKVDERRLRLNSNNEDRVIVVDQHGRGHSRTVQGAVDMVPEHNKERVKVYIYPGIYREKVFVPKSKPYVSLIGKINETAEVVITWNSKASDKSSSGQELGTFGSATVGVDSDYFCAAEITFQARKG 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01115 170 Pfam Pectinesterase 63 169 IPR000070 GO:0030599|GO:0042545
Bva12g01115 170 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 29 166 - -
Bva12g01115 170 Gene3D - 26 170 IPR012334 -
Bva12g01115 170 SUPERFAMILY Pectin lyase-like 60 168 IPR011050 -
Bva12g01115 170 PANTHER PECTINESTERASE QRT1 29 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01115 Bva-Chr12 10932135 10932747 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01115 10 166 Carbohydrate Esterase AT5G55590 45.198 1.41e-43 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01115 K01051 - gmx:100813382 209.534