Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01107 atgcaTATGTTGAAGCATATGTTGACCTCAATACGAGCTgcgaaaaagacaaaaaagagcGAGTCTGCCGcagctgaagaagaagataaaactTGTTATAGATTCTGGTCCTATTTGAGCTACAAATCCAATGGAGGACCACTTGGGAAGCCAGCAACGAGTATCCGCAGGATTGTGGTGCTTGCTAAGCATTCAAATCCTAAGATTCTCAAGACCAACCGGAAGTCGAGGTTCGGACAGGCTCTGTCACCGTACGACACTGACGAAGACGATGACGATGATGTTCTGCAAGATGATTGGCTCTCCGATGATGAATTTGCAGATGTTTCTGACTTTGATGTCAATGGCAAGAAATCTAAATCACAAACAATTAACGGAAAAAATAGGGTGCAGGAAAGGGGCTGGGCTATGAGATCTTTTGATTCTGGACAAAGCACTAAAATAAGCAAAAGTGAGAAAATGTCTTCCTTGCAACTGAATCGCGATGTAAAGCTTGTGAGAAATTCAGAGAATAAATATCCTTGGTTGTCAGAAGAGATAAATTTGGATAGCAAATGGTTCCCACTTCTTGATTACTTAAGCACATTCGGTTTAAAGGAATCACACTTTATCCAAATATATGAGAGGCACATGCCATCACTTCAAATTAATGTATGTTCAGCAAAGGAAAGGTTAGACTACTTACTCAGTGTTGGTGTCAAGCATAGAGATGTAAGGAGAATAATTTTGAGGCAGCCACAAATTCTGGAGTATACAGTAGAGAACAATCTGAAATGTCATGTTGCTTTCTTGATGGGCTTGGGTATACCAAATTCCCGAATAGGGCAAATCATTGCTGCTGCTCCATCCCTGTTCTCGTATAGTGTTGAAAATTCCTTAAAACCAACAGTTAGATACCTTGTAGAGGAAGTTGGCATCAAGGAAAAAGATTTGGGTAAAGTTATTCAGTTGAGCCCTCAAATTCTTGTTCAGCGTATAGATATTTCATGGAATACTCGATACACGTTTCTTTCCAAGGAGTTGGGAGCAACCAAAGATTGCATAGTAAAGATGGTGACAAAACATCCCCAACTTCTCCATTACAGCATAGATGACGGACTTCTGCCAAGGATAAATTTCTTAAGGAGCATAGGAATGCGAAATTCAGAGATCTTGAAAGTCTTGACTAGCCTTACTCAGGTGTTATCTCTATCACTGGAGGACAACTTaaagcccaagtacttgtactTGGTAAATGAACTTAACAATGAGGTGAAATCCTTGATCAAATATCCCATGTACCTTAGCTTATCTTTGGATCAGAGAATTCGTCCTCGTCATAAGTTCTTGGTTTCTCTAAAGAAAGTTCCAAAAGGACCATTTCCACTGGGATTACTTGTTCCTACTGATGAGTATTTCTGTCAGCAGTGGGCTGGAACTAGTTTGGATAAGTATTTGGCGTTTCGTCAGAGATTATTACTCAAGAAGTTTGCAGAGGAATACAAAGGCAAAATGTA 1496 0.3817 MHMLKHMLTSIRAAKKTKKSESAAAEEEDKTCYRFWSYLSYKSNGGPLGKPATSIRRIVVLAKHSNPKILKTNRKSRFGQALSPYDTDEDDDDDVLQDDWLSDDEFADVSDFDVNGKKSKSQTINGKNRVQERGWAMRSFDSGQSTKISKSEKMSSLQLNRDVKLVRNSENKYPWLSEEINLDSKWFPLLDYLSTFGLKESHFIQIYERHMPSLQINVCSAKERLDYLLSVGVKHRDVRRIILRQPQILEYTVENNLKCHVAFLMGLGIPNSRIGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVIQLSPQILVQRIDISWNTRYTFLSKELGATKDCIVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNSEILKVLTSLTQVLSLSLEDNLKPKYLYLVNELNNEVKSLIKYPMYLSLSLDQRIRPRHKFLVSLKKVPKGPFPLGLLVPTDEYFCQQWAGTSLDKYLAFRQRLLLKKFAEEYKGKM 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01107 498 SMART mt_12 275 307 IPR003690 GO:0003690|GO:0006355
Bva12g01107 498 SMART mt_12 385 417 IPR003690 GO:0003690|GO:0006355
Bva12g01107 498 SMART mt_12 418 449 IPR003690 GO:0003690|GO:0006355
Bva12g01107 498 SMART mt_12 312 344 IPR003690 GO:0003690|GO:0006355
Bva12g01107 498 SMART mt_12 349 380 IPR003690 GO:0003690|GO:0006355
Bva12g01107 498 SMART mt_12 239 270 IPR003690 GO:0003690|GO:0006355
Bva12g01107 498 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF9, CHLOROPLASTIC 49 490 - -
Bva12g01107 498 Pfam mTERF 191 265 IPR003690 GO:0003690|GO:0006355
Bva12g01107 498 Pfam mTERF 253 446 IPR003690 GO:0003690|GO:0006355
Bva12g01107 498 Gene3D Transcription termination factor 3, mitochondrial 249 485 IPR038538 -
Bva12g01107 498 PANTHER CGI-12 PROTEIN-RELATED 49 490 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01107 Bva-Chr12 10875722 10879945 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bva12g01107 mTERF 1.4e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01107 K15032 - gmx:102660933 665.611