Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01106 ATGTTCAAAGAAACTGATCATTATTCAATGCAAACTGCtcagaaacataaaatttccCGTGACTTTAGCAGGTTCTCCATTGAGCCTGTGCAAAACGTGGAATCATATGGCCCACCTCCAACTGAGAGCCCAGAATATTACTCATTGTCTGATAACAGCTGCCAAGCGAGCTACCCTTCAGAACAATATTGCACCCTTGATTCTTCAACCAATAGGTTCCCTCATCAGAATTCTCCATCTGCAGCCTCGCATAATGATAGCCCAGTATCTAAGCTACATTCAAAAGCATACATATTGAGGCCACAACATTCTCTTGAAATCATTAATGACTCGCTAGAGAATGACTCTTGCCTGACACGTGACCTTGATGATCTGAAGCACAAGATAAGAGAGCTCGAAACTGCTATGCTGGGACTTGATGGAGATGTTCTATATGATACTGTAATACCGGGAGAATCTGATCAAATTTTGTCAGAGACTGAGAAGTGGAAGAAAATGGTCGAGATGATATCTAGGGGGGATTTGAAAGAGATGCTATGTACTTGTGCAAAAGCAATAGCAGGAAATGATTTGGAGACAACTGAATCCTTGATATCAGAGTTGCGCAAAATGGTGTCCATTTCTGGCAGTCCAGTCCAAAAATTGGGAGCATACATGTTGGAGGGTCTTGTTGCTAGGCTCACCTCTTCGGGAAGCACAATCTGCAAAACCTTAAAATGCAAAGAGCCTACTGGTAACGAACACCTATCCTACATGAATGTACTTTATGAAATCTGTCCATATTTCAAGTTTGGATTTGTGTCAGCAAATGGAGCAATTGCTGAAGCCATGAGGGACGAAAATGGAGTccatataattgattttcagATTAGCCAGGGCAGCCAGTGGGTAAGTATAATCAAGGCTCTTGCTGGCCGGCACGGCGGACCCCCAAAGGTCAGGATAACTGGTATGGATGACTCCATCTCAGTTTATGCTCGGGGAGGGGGTCTCGATATTGTGGGGAAAAGGTTATCAAGACTTGCACAGTCATGTAATATACCTTTTGAGTTCTGTGCTGTTGAAATTCCTGCTTGTGAGGTGCAACTTGAAGACCTTGAACTTAGGCCTGGTGAAGCTGTTGCAGTGAATTTTGCCTTGATGTTGCACCACGTGCCAGATGAAAGTGTGGATGGTCAGAATCATCGTGACAGGTTGTTGAGATTGGTAAAGAACTTGTCTCCTAAGGTTGTGACCCTTGTTGAGCAAGAATCTAATACAAGCAACATTCCATTCTTCCCACGTTTCATCGAAACATGGAATTATTACTTGCCTGTTTTTGAATCAATTGACGCTGTTCTGCCGAGGGGGCACAAGGAAAGGATTAATGTGGAGCAGCACTGTTTGGCTCGAGAAGTTGTCAACTTGGTAGCTTGTGAAGGGGCTGAAAGAGTGGAGCGCCATGAGCTTCTGAAAAAGTGGAAATCACGTTTCACTATGGCTGGATTTACACCAATTCCGTTGAGCTCCTTTATCAACTCTACCATCAAGAATCTCCTGGAGAGCTACTGTGAAAATTACACTCTAGAAGAGAGAGATGGTGTTCTATATCTTGGTTGGATGAATCAAGCTCTTGTGGCTGCTTGTGCTTGGAGGTG 1637 0.4294 MQTAQKHKISRDFSRFSIEPVQNVESYGPPPTESPEYYSLSDNSCQASYPSEQYCTLDSSTNRFPHQNSPSAASHNDSPVSKLHSKAYILRPQHSLEIINDSLENDSCLTRDLDDLKHKIRELETAMLGLDGDVLYDTVIPGESDQILSETEKWKKMVEMISRGDLKEMLCTCAKAIAGNDLETTESLISELRKMVSISGSPVQKLGAYMLEGLVARLTSSGSTICKTLKCKEPTGNEHLSYMNVLYEICPYFKFGFVSANGAIAEAMRDENGVHIIDFQISQGSQWVSIIKALAGRHGGPPKVRITGMDDSISVYARGGGLDIVGKRLSRLAQSCNIPFEFCAVEIPACEVQLEDLELRPGEAVAVNFALMLHHVPDESVDGQNHRDRLLRLVKNLSPKVVTLVEQESNTSNIPFFPRFIETWNYYLPVFESIDAVLPRGHKERINVEQHCLAREVVNLVACEGAERVERHELLKKWKSRFTMAGFTPIPLSSFINSTIKNLLESYCENYTLEERDGVLYLGWMNQALVAACAWR 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01106 536 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 33 535 IPR005202 -
Bva12g01106 536 Pfam GRAS domain family 167 536 IPR005202 -
Bva12g01106 536 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 33 535 - -
Bva12g01106 536 MobiDBLite consensus disorder prediction 1 43 - -
Bva12g01106 536 MobiDBLite consensus disorder prediction 56 79 - -
Bva12g01106 536 ProSiteProfiles GRAS family profile. 157 536 IPR005202 -
Bva12g01106 536 Coils Coil 113 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01106 Bva-Chr12 10871898 10873535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01106 19 536 GRAS Transcription Factor Family AT5G48150 56.154 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva12g01106 GRAS 4.2e-127 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01106 - - gmx:100779977 766.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01106 12 10871898 10873535 Bva12g02656 12 19540745 19544477 BWGD