Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01104 ATGGAGGCTGCAATCAACTCCGGCGAAAACCACTCGGTTCCAGAGTTCCGGATGAGGCCTTCCAACGAACCGGCTTCTAATGATCTGAACCAATTTGGCTCAAGGCAGAGCTCTGACGCCGGAGCCACCGGCTCAGCTAGTGGCGGTGTTGCTAGGTACAAGCTGATGTCACCGGCGAAGCTCCCGATCTCGAGGTCGCCTTGTATCACGATTCCGCCGGGTCTGAGTCCGACGTCGTTTCTCGAGTCCCCGGTGCTTCTTTCTAACATGAAGGTGGAGCCTTCGCCGACCACTGGGTCCCTTGCCAAGCCTTTAACAATACATGGTTCAGTTGTTTCTGCTGAGTTTCCTGTAACCACTGCATGCTTCAATACCTATAGTGTTGATGACAGAAAATCCAGCTTCTTTGAGTTTAAACCACACAGTAGATCAGATATGGTTCCCACAGATGTCAACAACTGTGCATATGAACAATCAACGCAAATAGAAGGTCAAGGTCAAGCTCAATCATTTGCATCATCAACATTAGTTAAAAGTGAGATAGTGGGGCCCTCAAATGAATTAAGCCTGTCATCACCTGTTAAAATGGTTAATTCAGTGGGTTGTGCTCCTATTGAAGTCGATTTGGATGAATCAAACAACAGAATCAACACAGCCACTGGACTTCAAGCATCACAATTTGATGGTAGAGGAAGTGTCCTTTCAGTTGCAGCTGAAAGAGCATCTGATGATGGATATAATTGGCGAAAATATGGACAGAAACATGTTAAAGGAAGTGAATTTCCACGCAGCTATTACAAATGTACACATCCTAACTGTGAAGTCAAGAAACTATTTGAGCGCTCTCATGATGGTCAAATTACTGAGATAGTTTACAAGGGAACACATGATCATCCTAAACCTCAGCCAAGCCGCCGATACTCTGCTGGTACTGTTATGTCTATGCAAGAAGAGAGATCTGATAAAGCTTCATCTTTGGCTGGCCGAGATGACAAAGCATCCAATATCTGTGGTCAGGTATCTCACGCTACTGAACCCAACAGTACTCCAGAACTATCTCCTGTAGTGGGAAATGATGATAGTCCAGAGGGTGCTGGGTTTTTGTCAAGCAGAGGTAATGATGaggttgatgatgatgatctcTTCTCAAAGCGAAGGAAAATGGACATTGGAAATACTGACATCACTCCTGTTGTTAAGCCTATCCGAGAACCACGGGTTGTTGTACAAACTTTGAGTGAGGTTGATATATTGGATGATGGGTATCGCTGGCGTAAGTATGGACAGAAGGTGGTGAGAGGCAATCCTAACCCTAGGAGTTATTACAAATGCACAAATGCTGGCTGCCCTGTTAGAAAACATGTGGAGAGGGCATCTCATGATCCAAAAGCAGTAATTACCACATACGAGGGTAAACACAATCATGATGTACCTATTGCAAAGAGTAGTAGCCATGACACAGCCGGACCGCCGGTGGCAGGTGGACAGTCAAGAATTAGATCAGAAGAAAGTGATACTATTAGCCTTGACCTTGGGATGGGAATCAGCTCGGCCGCCGAAAATAGATCAAATGGGCAAGGACAAATGCTGCTCTTTGAATTTGATGGCAGTCAAACTCACACCAACAATCctaattttaagtttgttCATACAAACCCAGCTCCGACATACTACGGTGTTCTAAGCAATGGCTCAAACCCATATGGGTCGAGAGAAAACTTGAGTGAGGGTCCATCATTAAACCATGCCTCTTATCCTTGCCCGCAGAATATGGGAAGAATACTAACAGGTCCATA 1796 0.4454 MEAAINSGENHSVPEFRMRPSNEPASNDLNQFGSRQSSDAGATGSASGGVARYKLMSPAKLPISRSPCITIPPGLSPTSFLESPVLLSNMKVEPSPTTGSLAKPLTIHGSVVSAEFPVTTACFNTYSVDDRKSSFFEFKPHSRSDMVPTDVNNCAYEQSTQIEGQGQAQSFASSTLVKSEIVGPSNELSLSSPVKMVNSVGCAPIEVDLDESNNRINTATGLQASQFDGRGSVLSVAAERASDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIVYKGTHDHPKPQPSRRYSAGTVMSMQEERSDKASSLAGRDDKASNICGQVSHATEPNSTPELSPVVGNDDSPEGAGFLSSRGNDEVDDDDLFSKRRKMDIGNTDITPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPIAKSSSHDTAGPPVAGGQSRIRSEESDTISLDLGMGISSAAENRSNGQGQMLLFEFDGSQTHTNNPNFKFVHTNPAPTYYGVLSNGSNPYGSRENLSEGPSLNHASYPCPQNMGRILTGP 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01104 598 ProSiteProfiles WRKY domain profile. 413 478 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva12g01104 598 MobiDBLite consensus disorder prediction 307 321 - -
Bva12g01104 598 MobiDBLite consensus disorder prediction 1 48 - -
Bva12g01104 598 MobiDBLite consensus disorder prediction 23 44 - -
Bva12g01104 598 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 40 578 IPR044810 GO:0003700
Bva12g01104 598 MobiDBLite consensus disorder prediction 337 355 - -
Bva12g01104 598 ProSiteProfiles WRKY domain profile. 237 301 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva12g01104 598 Gene3D WRKY domain 230 302 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva12g01104 598 Gene3D WRKY domain 403 479 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva12g01104 598 SMART WRKY_cls 242 300 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva12g01104 598 SMART WRKY_cls 418 477 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva12g01104 598 Pfam WRKY DNA -binding domain 419 475 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva12g01104 598 Pfam WRKY DNA -binding domain 243 299 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva12g01104 598 SUPERFAMILY WRKY DNA-binding domain 410 478 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva12g01104 598 MobiDBLite consensus disorder prediction 292 385 - -
Bva12g01104 598 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 40 578 - -
Bva12g01104 598 SUPERFAMILY WRKY DNA-binding domain 239 301 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva12g01104 598 MobiDBLite consensus disorder prediction 475 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01104 Bva-Chr12 10861170 10867368 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01104 56 598 WRKY Transcription Factor Family AT4G26640 57.866 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva12g01104 WRKY 1.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01104 - - gmx:100816583 887.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01104 12 10861170 10867368 Bva12g02659 12 19548477 19554027 BWGD