Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01102 ATGCCTAGTGTTAATCCTGACTCATTTGACAAAGATTCTGAGCCATTTGTGGAAATTGATCCAACTGGGAGATATGGTCGATACAGTGAACTTCTGGGATCTGGTGCAGTGAAGAGGGTGTATCGTGCATTTGATCAAGAAGAAGGCATAGAGGTGGCATGGAATCAGGTGAAACTCAAGAACTTCACCAACGACCCAGCTATGGTGGATAGGCTTTACTCTGAAGTGCGATTGCTCAGAAGCTTGACCAACGAAAACATCATTGCCCTTTACAGAGTATGGAGGGATGAGGAGCATAACACTCTCAATTTCATAACTGAGGTCTGCACCAGTGGAAATTTGAGGGAGTATAGGAAGAAACACAAGCAAGTTTCCATGAAGGCTTTGAAGAAGTGGTCTAGGCAGATTCTCAAAGGGTTGAATTACTTGCACCTGCATGACCCTTGCATTATTCACAGAGATCTCAATTGCAGCAATGTATTTGTCAATGGGAACACTGGCCAGGTTAAGATTGGTGACTTGGGTATGGCAGCAATAGTGGGCAAGAATCACTCAGCACATTCAGTTCTTGGGACACCAGAATTCATGGCGCCGGAATTGTATGAGGAACATTATACAGAACTGGTGGATATATACTCTTTTGGAATGTGTGTTCTGGAGATGGTGACAGTAGAGATCCCTTACAGCGAGTGTGACAGTATTGCCAAGATATACAAGAAGGTATCTTCAGGCGTGAGACCTCAAGCACTGAACAAGGTTAAAGATCCTGAGGTGAAGGCATTCATTGAGAGGTGCCTTGCTCAGCCAAGGGCAAGACCTTCTGCTGCTGAGCTTCTCAACGATCCCTTCTTCGATAagattgatgatgatgaaaatgacgACAACGGTTGCCCATA 896 0.4375 MPSVNPDSFDKDSEPFVEIDPTGRYGRYSELLGSGAVKRVYRAFDQEEGIEVAWNQVKLKNFTNDPAMVDRLYSEVRLLRSLTNENIIALYRVWRDEEHNTLNFITEVCTSGNLREYRKKHKQVSMKALKKWSRQILKGLNYLHLHDPCIIHRDLNCSNVFVNGNTGQVKIGDLGMAAIVGKNHSAHSVLGTPEFMAPELYEEHYTELVDIYSFGMCVLEMVTVEIPYSECDSIAKIYKKVSSGVRPQALNKVKDPEVKAFIERCLAQPRARPSAAELLNDPFFDKIDDDENDDNGCP 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01102 298 CDD STKc_WNK 24 284 - -
Bva12g01102 298 PANTHER SERINE/THREONINE-KINASE WNK11-LIKE PROTEIN 1 295 - -
Bva12g01102 298 Gene3D Phosphorylase Kinase; domain 1 10 107 - -
Bva12g01102 298 ProSiteProfiles Protein kinase domain profile. 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g01102 298 Gene3D Transferase(Phosphotransferase) domain 1 109 290 - -
Bva12g01102 298 SUPERFAMILY Protein kinase-like (PK-like) 19 285 IPR011009 -
Bva12g01102 298 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 295 - -
Bva12g01102 298 Pfam Protein kinase domain 29 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01102 Bva-Chr12 10849358 10851276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01102 5 287 MAP Kinase Kinase Kinase AT5G55560 81.625 0.0 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Bva12g01102 Pkinase 1.3e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01102 K08867 - gmx:100818126 522.316