Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01101 ATGCAGAGAAGAACAGATTGCACTGGATTCTTAACGAGGCTGGTTTGCCTTGctatccttcctttctttgtcATGGTCCGCACAGCAGGTGAGTTGCCAGAATCTGAGTCTTTGTTCAATTTCATTAGAGCCATTGATCCAAAAAATGAACTTAACATTACCTGGATGGGTTCTGCACTGCATCCCTGCTTGCTTCACTTGAATGGTATAAAATGTAACTCAGATGCCACCAACGTTGTAGAGATAAGCCTCGTAAACATGAACCTTAGTGGTATATTAGATACAGATTCTCTATGCAGGCTGCAAAAGCTGAAAGTTGTGAACTTAGCTAAGAATTTCATCAGAGAAAACATTCCTGATTCGATTTTGCACTGCAcaagattgatgtatttaAATCTAAGCAGCAACCAGTTGAGTGGGAGATTACCAAAAGCTCTGGCAAAACTGAAATATCTGAGGGAATTGGACATCTCTAACAATAACCTTTCTGGCATCATTCTGAAGCAACTAGGACTTAGGCATCAGTTTAGTTTCTCGGTGGTTTCAAGTACAAGACAAAAGAATAGTCCCAGAGAAATGTTTATGGAAGTGGACAGAGATCAACCAACATCAGATCCTCCAAGCAACAACTCGACCtccaatgaaaataataagcCATCCAATAAACTGTTCAagaaatatttaccaataattGTGGGCATTGGAGTGTTTTTGTTAGCCGTTTACTTTCTGGGCAAGACGGGAGCTAAATTATCTTCAGGGAGAGTGTTAGGGAAGCCTTCAGACCTGAAGATACCAAAATCTCCAGAGAAGGAGGTTTTGAAAAGTCATCTGGATTCTCCAATCAAAGAGCCTGCAGCTGTGATTACAGAAGAGGTAGAGCCAAAGAACAATCAAGAGCTTGTATTCTTTGTTGAGAAGAATGAAAGGTTTACACTGGAGGACCTGCATAGAGCCTCAGCTGACTTAAGAAATGAAAGCTTTAGCAGTAATCTTTACATGGTAAAAATCAATGATAATGCCCATTATGCTGTCAAAAGATTCAAGAATTTGCAGGTATCACCTGAAGAATTTGGCCAAACAATGAAGCAGATAAATAAGGTGAAGCACAGAAATATTCTTCCTTTGGTTGGTTACCGCTGTACCGGTGAAGAAAAACTCATCATTTACAAATATCAAAGCAATGGGAGTCTGGCAAATCTTGTAGAAGAGAATATTAAGGGTAAAAGAGATTTCCCATGGAAACTGAGGTTGTCTATAGCATGTGGGATTGCAAGGGGTTTGGCCTTCATATATGACAAGTGGAGTGGGAAGGAGATAATTCCTCATGGAAATCTTAAGCTGTCAAATATCCTTCTgaatgacaacaatgaacCAGTGATAAGTGAGTATGGATTATCAAAATTCTTAGACCCTAGCAGAGCTTTCCTCTTTTCCTCTCATGGATACACGGCCCCAGAAAAGACTATGACAGAAAAAGGAGATGTCTATAGCTTTGGAGTGATTCTCATGATTTTGCTGACAGGCAAAAGTGTAGAAGTAAGTGGAATAGACCTCCCCAGATGGGTCAAGTCCATGGTGAGGGAGGAATGGACAGGAGAGGTCTTTGACAAGAAGATTGAGGAAGCAGAATATCAGTGGGCATTTCCTGTGCTCAACATAGCCCTCATGGGTGTATCGCGTTTTGCCGAAAACCGGCCAAGCATGGAAGAGATTTTGGAGAAGATAGAGGAAGTAATGGAAGAACATGAACAGCAACTTCATATTGGTCCACCATGTTGCCCTAATGCCAGCCATGAAGATTGTTGTTCACTTCACAAGATTATACCTGATACATGGGATTCTCCAGGATCAAATTATTG 1862 0.3926 MQRRTDCTGFLTRLVCLAILPFFVMVRTAGELPESESLFNFIRAIDPKNELNITWMGSALHPCLLHLNGIKCNSDATNVVEISLVNMNLSGILDTDSLCRLQKLKVVNLAKNFIRENIPDSILHCTRLMYLNLSSNQLSGRLPKALAKLKYLRELDISNNNLSGIILKQLGLRHQFSFSVVSSTRQKNSPREMFMEVDRDQPTSDPPSNNSTSNENNKPSNKLFKKYLPIIVGIGVFLLAVYFLGKTGAKLSSGRVLGKPSDLKIPKSPEKEVLKSHLDSPIKEPAAVITEEVEPKNNQELVFFVEKNERFTLEDLHRASADLRNESFSSNLYMVKINDNAHYAVKRFKNLQVSPEEFGQTMKQINKVKHRNILPLVGYRCTGEEKLIIYKYQSNGSLANLVEENIKGKRDFPWKLRLSIACGIARGLAFIYDKWSGKEIIPHGNLKLSNILLNDNNEPVISEYGLSKFLDPSRAFLFSSHGYTAPEKTMTEKGDVYSFGVILMILLTGKSVEVSGIDLPRWVKSMVREEWTGEVFDKKIEEAEYQWAFPVLNIALMGVSRFAENRPSMEEILEKIEEVMEEHEQQLHIGPPCCPNASHEDCCSLHKIIPDTWDSPGSNY 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01101 620 Pfam Protein kinase domain 332 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g01101 620 Pfam Leucine rich repeat 103 162 IPR001611 GO:0005515
Bva12g01101 620 Gene3D Phosphorylase Kinase; domain 1 284 392 - -
Bva12g01101 620 PANTHER OS05G0588300 PROTEIN 17 613 - -
Bva12g01101 620 MobiDBLite consensus disorder prediction 198 219 - -
Bva12g01101 620 SUPERFAMILY Protein kinase-like (PK-like) 331 576 IPR011009 -
Bva12g01101 620 Gene3D Ribonuclease Inhibitor 33 193 IPR032675 -
Bva12g01101 620 PANTHER TYROSINE KINASE FAMILY PROTEIN 17 613 - -
Bva12g01101 620 Coils Coil 566 586 - -
Bva12g01101 620 Gene3D Transferase(Phosphotransferase) domain 1 394 590 - -
Bva12g01101 620 SUPERFAMILY L domain-like 38 171 - -
Bva12g01101 620 MobiDBLite consensus disorder prediction 202 219 - -
Bva12g01101 620 ProSiteProfiles Protein kinase domain profile. 317 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01101 Bva-Chr12 10845234 10847194 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01101 32 579 Receptor kinase-like Gene Family AT4G23740 30.906 2.80e-67 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bva12g01101 Pkinase 3e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01101 - - gmx:100807491 697.967