Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01095 ATGGGTATTTCTCGTGATTCCATGCATAAGAGGCGTGCCACTGGAGGCAAGAAGAAGGCCTGgcggaagaagagaaaGTACGAGTTGGGTAGGCAACCAGCCAACACAAAACTGTCGAGCAACAAAACTGTTAGGAGGGTTAGGGTTCGAGGTGGGAATGTCAAGTGGCGTGCTTTGAGGCTTGACACTGGAAATTACTCTTGGGGAAGTGAAGCTGTGACTAGGAAAACAAGAATTCTTGATGTTGTGTACAATGCTTCTAACAATGAGTTGGTTCGTACTCAGACATTGGTCAAGAGTGCTATTGTTCAGGTTGATGCAGCACCCTTCAAGCAGTGGTATGTCCAGCATTATGGCGTCGACCTTGGTCGCAAGAAGAAGAGTGCAACTTCTGCCAAGAAGGAAGGCGAGGATGGTGAAACTGCAACTGAGGAAGTGAAAAAGAGCAACCATGTCTTGAGAAAGATAGAGAAGCGCCAACAAAACCGAAAGCTTGACCCTCATATTGAAGAACAATTTGGAGGTGGTCGTTTATTGGCTTGTATCTCATCTCGACCTGGTCAATGTGGTCGTGCTGATGGTTATATCTTGGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGATTCAGAGGAAGAAGGGCAAGGGAGCTGCTGCCTA 659 0.4583 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYVQHYGVDLGRKKKSATSAKKEGEDGETATEEVKKSNHVLRKIEKRQQNRKLDPHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGAAA 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01095 219 Pfam Ribosomal protein S8e 5 197 IPR022309 -
Bva12g01095 219 MobiDBLite consensus disorder prediction 1 41 - -
Bva12g01095 219 PANTHER 40S RIBOSOMAL PROTEIN S8 1 219 IPR001047 GO:0003735|GO:0005840|GO:0006412
Bva12g01095 219 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Bva12g01095 219 Gene3D Ribosomal protein S8e, subdomain 108 176 IPR042563 -
Bva12g01095 219 Gene3D - 26 213 - -
Bva12g01095 219 MobiDBLite consensus disorder prediction 125 147 - -
Bva12g01095 219 MobiDBLite consensus disorder prediction 11 26 - -
Bva12g01095 219 TIGRFAM eS8: ribosomal protein eS8 1 199 IPR001047 GO:0003735|GO:0005840|GO:0006412
Bva12g01095 219 PANTHER 40S RIBOSOMAL PROTEIN S8 1 219 - -
Bva12g01095 219 CDD Ribosomal_S8e_like 5 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01095 Bva-Chr12 10820022 10822386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01095 1 206 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 83.981 9.28e-126 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01095 K02995 - nnu:104594192 404.831