Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01092 ATGCCTCAGAGAGAAACTTGCAGTTCACTGAAAGAACCTCGCCTTGTGGCCAGGAAGTTCTTGGCCAGACCACAACATGAAGGAGTTGGGGCTGTTGTGAGAAGAAGCATTGGACGGTTTGAGCTGAAGTACTTTGATCCATTTCTTGTCTTGGATGAATTCTCAGTTACTGCTCCTGCTGGCTTTCCTGATCATCCACATAGAGGATTTGAGACAGTCACATACATGTTGCAGGGTTCTGCCACGCATGAAGACTTCGAAGGACATAAGGGAACAATAGAAGCTGGTGACGTGCAGTGGATGACTGCAGGAAGAGGGATAGTTCACTCAGAAATGCCTGCAGCCCAAGGCACCCAAAAGGGTCTGCAGCTGTGGATCAATCTTGCttccaaatataaaatGATTGAGCCGAGGTATCAAGAAATGCTGAGCAAGGACATAGCAGAAGCTGTGGAAGATGGCATCAAGGTTAGAGTAATAGCAGGTGAAGCACTGGGAATAAAGTCTCCAATATACACAAGGACTCCAACCATGTACTTGGACTTTACTCTCAATCCAGGGGCTCATCAGCAACAACCAATACCAAAAGCTTGGAATGCATTTGTCTATGTATTGGAAGGGGAGGGAGTGTTTGGCAACCCAAAATCTCAGCCAGTAGCTTCCCaccatattcttcttcttggtCCTGGGGATGGCTTGGAGGCATGGAACAAATCTTCTAAGGTCCTCAGGTTCATTCTTGTTGGAGGTGAACCACTAGGTGAGCCTGTTATGCAATTTGGACCCTTTGTGATGAATACTCAAGAAGAGATTGACCAAACCATTgatgattttgagaattttgcCAATGGATTTGAGAAAGCAAAACATTGGAGGTCTGAAGCAGCAGCTAGTTTTggttttta 905 0.4343 MPQRETCSSLKEPRLVARKFLARPQHEGVGAVVRRSIGRFELKYFDPFLVLDEFSVTAPAGFPDHPHRGFETVTYMLQGSATHEDFEGHKGTIEAGDVQWMTAGRGIVHSEMPAAQGTQKGLQLWINLASKYKMIEPRYQEMLSKDIAEAVEDGIKVRVIAGEALGIKSPIYTRTPTMYLDFTLNPGAHQQQPIPKAWNAFVYVLEGEGVFGNPKSQPVASHHILLLGPGDGLEAWNKSSKVLRFILVGGEPLGEPVMQFGPFVMNTQEEIDQTIDDFENFANGFEKAKHWRSEAAASFGF 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01092 301 CDD cupin_pirin_N 31 128 - -
Bva12g01092 301 Gene3D Jelly Rolls 148 253 IPR014710 -
Bva12g01092 301 SUPERFAMILY RmlC-like cupins 14 293 IPR011051 -
Bva12g01092 301 PANTHER - 1 299 - -
Bva12g01092 301 PANTHER PIRIN-RELATED 1 299 IPR012093 -
Bva12g01092 301 Pfam Pirin C-terminal cupin domain 179 283 IPR008778 -
Bva12g01092 301 Pfam Pirin 33 126 IPR003829 -
Bva12g01092 301 CDD cupin_pirin_C 176 252 - -
Bva12g01092 301 Gene3D Jelly Rolls 27 279 IPR014710 -
Bva12g01092 301 PIRSF Pirin 12 292 IPR012093 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01092 Bva-Chr12 10810442 10813195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01092 13 289 Calmodulin-binding Proteins AT3G59220 59.857 1.44e-126 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01092 K06911 - gmx:100790637 560.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01092 12 10810442 10813195 Bva12g02673 12 19622509 19625196 BWGD