Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01082 ATGTCAATGTCGGACCTAGATAGGCAAATAGAGCAACTCAAGAAGTGCGAGCCTCTAAAGGAGTCGGAAGTGAAGGCACTTTGTCTCAAAGCTATGGAAATCCTTGTTGAAGAAAGCAACGTCCAAAGGGTTGATGCTCCTGTCACTATATGCGGTGATATCCATGGTCAGTTTTATGACATGAAGGAGCTTTTCAAGGTTGGAGGAGATTGCCCCAAAACAAACTATTTATTTCTTGGGGATTTTGTTGATAGAGGATATTACTCAGTTGAAACATTTCTACTTCTGCTCGCTCTTAAGGTGAGGTATCCAGATCGTATTACACTCATTAGGGGTAACCATGAGAGCCGTCAGATCACACAGGTGTATGGATTTTATGATGAATGCCTTCGTAAATATGGTTCAGTCAATGTTTGGAGATATTGCACTGATATATTTGACTACTTAAGCTTGTCAGCTCTTATTGAGAACAAGATTTTCAGTGTGCACGGTGGCCTGTCTCCTGCCATCTCAACATTGGATCAGATTCGTACTATTGATAGGAAACAGGAGGTACCTCATGATGGTTCCATGTGTGACCTCTTATGGTCAGATCCAGAAGATATTGTTGATGGATGGGGTCTGAGTCCCCGTGGCGCTGGCTTCTTATTTGGTGGTAGTGTTGTTACCTCTTTTAACCACGCCAATAATATTGACTATATATGCCGTGCTCATCAGTTGGTCATGGAAGGATTTAAATGGATGTTCAATGAGCAGATAGTTACTGTCTGGTCAGCTCCGAATTATTGCTACAGATGTGGTAACATTGCGGCAATTCTGGTGCTTGATGAAAATCTTAATCACCAGTTTCGCGTGTTTGAAGCTGCTCCACAGGAATCCAGAGGGCCGCCAGCAAAAAAGCCTGCACCAGATTACTTCTTGTg 923 0.428 MSMSDLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGSMCDLLWSDPEDIVDGWGLSPRGAGFLFGGSVVTSFNHANNIDYICRAHQLVMEGFKWMFNEQIVTVWSAPNYCYRCGNIAAILVLDENLNHQFRVFEAAPQESRGPPAKKPAPDYFL 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01082 307 Pfam Calcineurin-like phosphoesterase 47 239 IPR004843 GO:0016787
Bva12g01082 307 PRINTS Serine/threonine phosphatase family signature 47 74 IPR006186 GO:0016787
Bva12g01082 307 PRINTS Serine/threonine phosphatase family signature 144 170 IPR006186 GO:0016787
Bva12g01082 307 PRINTS Serine/threonine phosphatase family signature 252 268 IPR006186 GO:0016787
Bva12g01082 307 PRINTS Serine/threonine phosphatase family signature 76 103 IPR006186 GO:0016787
Bva12g01082 307 PRINTS Serine/threonine phosphatase family signature 109 133 IPR006186 GO:0016787
Bva12g01082 307 PRINTS Serine/threonine phosphatase family signature 173 200 IPR006186 GO:0016787
Bva12g01082 307 PRINTS Serine/threonine phosphatase family signature 230 250 IPR006186 GO:0016787
Bva12g01082 307 Gene3D - 1 307 IPR029052 -
Bva12g01082 307 ProSitePatterns Serine/threonine specific protein phosphatases signature. 110 115 IPR006186 GO:0016787
Bva12g01082 307 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP-X ISOZYME 1 3 307 - -
Bva12g01082 307 SUPERFAMILY Metallo-dependent phosphatases 2 296 IPR029052 -
Bva12g01082 307 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 3 307 - -
Bva12g01082 307 SMART pp2a_7 19 290 IPR006186 GO:0016787
Bva12g01082 307 CDD MPP_PP2A_PP4_PP6 5 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01082 Bva-Chr12 10752021 10756038 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01082 26 225 Calmodulin-binding Proteins AT5G63870 37.190 5.51e-37 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01082 K15423 - cit:102608319 618.616