Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01073 ATGCAACAGACAGAGGTATTTGGTTTCCGCAGGTTCATGTTACAGTTCATCCTTATTTTCAATGTTTACGAAGCCTCAGGTTGTCTTGTTCCACCAAGAACCATTACTGTTTCTCGTTCTGGAGGCCAAGGAACCTCCAGAACCATCCAAGCAGCCATTGATTCTGTCCCTCCAAATAACAACAGATGGGTTCGCATCGTAATTCCTGCTGGATTGTATAGGGAAAGAGTTGGGATTCCTGCAGACAAGCCATGCATTTATCTTAAAGGAGCTGGGAGCAACTCCACCATCATAGACTGGAATGATGCTAGCCAGACGAATACCAGTGCCACCTTAACAGTTTCAGCAAGTGACTTTTTAGCAAAGGACGTTGCAATCAagAATTCATACAACCTTCTGCCAAGGCCACAAAATGAGATCATTAGTGCAGCAAAAAAACCAGCAGTGGCAGTAGAACTTGTAGGAGATCGagctgctttctttttctgtacTTTTCAAGGGGTGCAAGATACCGTGTTTGATGAAAATGGCAGACATTACTTCCACAAGTGCACTATTCAAGGTGAAATAGACTTCATATTTGGAAATGGTCAATCCCTTTATCAGCAATGTGTAATTGAGTATGTGCCGGGTCCTGAAGGCTACATTGGTTTCATAACAGCACAAGGAAGAAAAACGATCCACCAAACAAGTGGGTTTGTGTTTGACAGGTGTATCATAACAGGGAAAGGACAAGTATACCTTGGGAGAGCTTATGGAGTTTTTTCCAGAGTTATTATTGCTAATTCCACTCTAAACGATGTGGTTTATCCCATTGGTTGGTCTGCTTGGGACTCTAAGGGTCATGAAGAACGCTTGACATATGTGGAGGAGGGTAACAGAGGGGCAGGGGCAGATAAGTCTAAGCGTGTGCCTTGGCTCAAGCATATGGGTCCAGCTGAGCTCAATCAGTTCTTGAGTACCAAATATATTGACACAGAAGGATGGCTTTCTAAACTACCAAGATA 1007 0.425 MQQTEVFGFRRFMLQFILIFNVYEASGCLVPPRTITVSRSGGQGTSRTIQAAIDSVPPNNNRWVRIVIPAGLYRERVGIPADKPCIYLKGAGSNSTIIDWNDASQTNTSATLTVSASDFLAKDVAIKNSYNLLPRPQNEIISAAKKPAVAVELVGDRAAFFFCTFQGVQDTVFDENGRHYFHKCTIQGEIDFIFGNGQSLYQQCVIEYVPGPEGYIGFITAQGRKTIHQTSGFVFDRCIITGKGQVYLGRAYGVFSRVIIANSTLNDVVYPIGWSAWDSKGHEERLTYVEEGNRGAGADKSKRVPWLKHMGPAELNQFLSTKYIDTEGWLSKLPR 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01073 335 PANTHER PECTINESTERASE 25 335 - -
Bva12g01073 335 SUPERFAMILY Pectin lyase-like 30 331 IPR011050 -
Bva12g01073 335 Gene3D - 31 334 IPR012334 -
Bva12g01073 335 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 25 335 - -
Bva12g01073 335 Pfam Pectinesterase 36 326 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01073 Bva-Chr12 10704521 10706541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01073 48 330 Carbohydrate Esterase AT1G05310 40.411 1.38e-66 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01073 - - tcc:18613720 318.546