Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01065 ATGGAGGATATCGGTGTCTCTGTGGCATCTAAGATTGCAGAATACCTGGTGGATCCAACAATACGTCATGCTCGCTATTTGTTCTGTTTCAACAACATTTTGGAAAgttttcaaactaaaaaagacaatTTGGTGTTAACCCGAGACAGCATCCAGCAACGTGCTAGGtatgacaaaaacaaaactagaaAAATCGAGCCAGCTGTTGAGAACTGGCTACATGATGTGGAAACTGCTTTAGAACAAGTACACAAGCTTGAAGTAAAAATTGAAGCGTCTAATAGATGCTTTGGTGGGTGTTGTCATTATTTTCTAGCAAGGGAAATGGGCAAAAGGACAGAGAAAATGATTAAGCTCAATGAGAATATCTACTTTAGGTCATTTTCTCAGCCCACTGAACTTCCAGGTATGAAATacttttcttccaaaaattttgtttatttcaaaTCGACAGAATCTGCTTGCAATGAACTTTTGGTGGCACTGAGAGATAGCAACATTTGCATGATGGGCCTGCATGGTATGGGGGGCTCAGGCAAAACTAGTTTGGTGAAGGAGGTAGGTAAGAAGGCTGAGAATTTGCTTCTATTTGACAAGGTTATAATTGCAGTTGTCTCTCAGACTCCAAATGTCAGAGAAATCCAAAATCAAATTGCAGATCAGTTGGGTTTGAAATTGGAGGAAGAATCAGAATTTGGTAGAGCTCAACGACTATATAGGAGATTAGAGAATGGGCAGACTCTTATCATCTTGGATGATTTGTGGGAGAATCTAGATTTTGAAGCTATAGGGATTCCTTCCAATGACAACAACATAGGTTGCAGAGTCCTCATAACTACACGAATTCGAAGAGTATGTGTTTCTATGGGCTGCACAAAAATAACAGAACTATCTCTATTATATGAAGAGGAAAGttggtttttatttaaactacGTGCAGAGATAGCTGATGACTGCCAAGATGACTTTAAGGATGTTGCAAGGAAAATATCTATTGAATGTAAAGGTTTGCCTATTGCAATTGAGACTGTGGGAAGAACATTAAGGGGAAAGAGCTTTGAGGAGTGGGAATTAGCATTGTTAAGGCTAAAGGAATCTCAGACAGTAGATATTGACGTGGGTCTGAGAAGTCCTTATGCATGTCTCAGATTAAGTTATGATAATTTGAGGAACCAAGCAGCCAAGTCTCTCTTCTTGTTGTGTTCTATATTTCCTGAAGATTATAAGATTAATAAGGAGGATTTGTTTCGCAATTGGAAGGGACTGCAGGTGCCAGGTGAGCCTCTTGGCAAAGCAAGGAGAGAGGTGAATGCAGCTGTTAACGTCCTCCTAGATTGTAATCTCTTAATGCCTGGTGATAGTGCGCAATATGTAAAAATGCATGATTTGGTTCGGGATGTAGCCTTGTGGATTGCTTCAGAGGAAGGTCAAGCAGTTATGGTAGCTTCAAGTAAAGATGCGAGATTACTGGTAGGAGATGAAACTGTAAGTCAAAAGGCCAAAATATCTTTGTGGGAGATGGTAAATGGTCAGCTCAGTGATCAGTTAAATTGCCCAAAACTTGATACTCTATTGCTTCATTCTAAAGATGTAGGATTCGAGGTAGCAAATGCATATTTTGGAGGGATGGAAGCACTCAAAGTCTTGTCCTTCATAAGATTTAGCTATTCTTGGCATGTATATAAGTGGGGGTTGACATCAGTGTTGAGTTTGTCACTACCACAGTCAATCAAGTCATTGACAAGTCTTCAAACTCTGTGCTTGAGAGGATATAAACTAGATGACATATCTATTTTGGGAAGTCTAAAAGGGCTTGAGATTCTTGACTTGCGTGGTTCTTCTTTTGACGAATTGCCCATTGGAATTTCAGAATTGAAGAAACTGAAGCTTCTGGATTTGTTCAACTGTTCTATTGCAAAGAATAACCCCTATGAAGTTATAGGAAGAGTTTCACAGCTTGAGGAGTTGTACATATGGACAACTAGGGATCATCCTCTAGAGAATGTCTCACTCCCAACATTGCAGAGGTATGCTATAGGCTACACCACCAGATCAATCTACACTTTTGCATCAAACCCGTATGAATTTCTCGAAAAGTATAAGCCAACAAGAGCTTTATGCATAGAAAAATTTGACGTATCTTCTCCAAGTTACGCAGCACCATCATCATCCATCAGAGATCTCTTACCAAGAGCAGAAAGCCTTCATCTGCGGCACCTTGAGGGAGGccacaaaaatataatccCATGCATGGATAAAGCAGGTATGAATCACTTGATTGGTTTAATACTCGAGTCTTGTTCAGAGATGGAATGCCTTGTGGATAGTAGAAATACCAATCCTCACATGAATCTGTCTCCAAAAGAAGCTGTATTCTCCGAGCTGGTTGCCATAAGACTACAACACATGAATCGTCTTGAAGAATTATTCCGGGATCCATCTTCATCATGCTCTCTCAAAAATCTGCAGGAGGTAAGAATAAATTACTGCCCCAAATTGTATAGCATATCTTTTCCAAGGTATTCAAATCTAAGTAGCCTTAAGATCTTGAGATTGGAAAGGTGTGAAATGTTAATGTCATCAATCTTCACACCATCTATTGCCCAAACTCTGGTGCAACTGGAGCAGATGAATATATGTGAATGCAAAAGGTTGAagcatataataaatgaagttGAGGTAGAAGAAATTGTTGATGGTGTTAGCAGTCAAAGTTATTCCTTGAAAATATTCCCAAATTTGAGGATTCTTAGTGTTGAGGGATGTGAAACTTTGGAGTCAATATTCCCAATCTATTTTGCTAGAGGTTTAGAAAGATTGGAAGATATAGTCATAAGCAGGAATCCTAAGTTGAAGTATGTATTTGGCACACACAAGGAAGGTCAGCTCTCATCGTCTTCAAACGAGATTGTGATGGATATTAACTTACCTTCTCTAAGAAGACTCACGCTCAATTCGTTGACAAGCCTAATCAACATCTACCCAAAACGTTGTAATCCGAGGTCACCAAATTTGAAGGTGTTGAGATATTGTAACTGTCAGGAATTGTCCACCATCACTGTTCATAAAATGGTGGTTTGTTCAGATATCCAACAAGATTACAAGGCTACCAAGGAAAGGGAAATATTCTGGCTGGTGGACGCACCATCTTACCAATGGTGCAATGAACACATTCCTGCAGATTTGCAAGCTTTCCTAAGATTTCAAGATCTGAGTTTTGAGCGTGATAGAGTAGAAGGAATTTTTCAACTCCAAGTTAATGAATGGTCTGATGGTAACAGAGGAGAACAGCCATTGAGGTCAAATTTAGACAATCTGAATTTACATGATTTATCTGAGTTACAGTTCATCTGGAAGGGCCTACCAAATTTTCTTATCCTCGAGAAACTTCGATTCGTGAAATTGGACACTTGCCGAAAACtgaaaaacattttctctGTGACCATTGTTAGAAGCTTACCAAAGTTAGAGAGTCTGAAAATAATCAACTGTGAGGAATTGGAGGAAATTGTTTCCTCAAATTCAGAGGATGAAGAAAACCATATAAATCAGTTTGTTTGCTTCCCAGAACTGAGATATCTTGAAGTTATGAAATGCGACAAATTGAAGTGTCTTTTCGATGATTGCATGGTTTCTCATTTCCCCAAATTAGCAACTCTGAAAATAGTGAAGTGCTCCCAACTAGTCTATGCTTTTGGTTTGGAACATAAAGCTAAGCATGAAGGTCGAGGAAAGTGTCGAAGAGCTAAAGATGCAAGGCAAGTGGTGCTTCCAAAGCTGGAACAAGTGGAGCTCGTAAGTTTGCTGAATTTCACTAAGATCTGCCAGGGGTTCAAGTTGCAGCAGCCTTTAAAATCTTCCACGGCGCTCGATTGCCCTAAATATAGCTCTTCGCATTCCATTTACAAGGGGTA 3914 0.3845 MEDIGVSVASKIAEYLVDPTIRHARYLFCFNNILESFQTKKDNLVLTRDSIQQRARYDKNKTRKIEPAVENWLHDVETALEQVHKLEVKIEASNRCFGGCCHYFLAREMGKRTEKMIKLNENIYFRSFSQPTELPGMKYFSSKNFVYFKSTESACNELLVALRDSNICMMGLHGMGGSGKTSLVKEVGKKAENLLLFDKVIIAVVSQTPNVREIQNQIADQLGLKLEEESEFGRAQRLYRRLENGQTLIILDDLWENLDFEAIGIPSNDNNIGCRVLITTRIRRVCVSMGCTKITELSLLYEEESWFLFKLRAEIADDCQDDFKDVARKISIECKGLPIAIETVGRTLRGKSFEEWELALLRLKESQTVDIDVGLRSPYACLRLSYDNLRNQAAKSLFLLCSIFPEDYKINKEDLFRNWKGLQVPGEPLGKARREVNAAVNVLLDCNLLMPGDSAQYVKMHDLVRDVALWIASEEGQAVMVASSKDARLLVGDETVSQKAKISLWEMVNGQLSDQLNCPKLDTLLLHSKDVGFEVANAYFGGMEALKVLSFIRFSYSWHVYKWGLTSVLSLSLPQSIKSLTSLQTLCLRGYKLDDISILGSLKGLEILDLRGSSFDELPIGISELKKLKLLDLFNCSIAKNNPYEVIGRVSQLEELYIWTTRDHPLENVSLPTLQRYAIGYTTRSIYTFASNPYEFLEKYKPTRALCIEKFDVSSPSYAAPSSSIRDLLPRAESLHLRHLEGGHKNIIPCMDKAGMNHLIGLILESCSEMECLVDSRNTNPHMNLSPKEAVFSELVAIRLQHMNRLEELFRDPSSSCSLKNLQEVRINYCPKLYSISFPRYSNLSSLKILRLERCEMLMSSIFTPSIAQTLVQLEQMNICECKRLKHIINEVEVEEIVDGVSSQSYSLKIFPNLRILSVEGCETLESIFPIYFARGLERLEDIVISRNPKLKYVFGTHKEGQLSSSSNEIVMDINLPSLRRLTLNSLTSLINIYPKRCNPRSPNLKVLRYCNCQELSTITVHKMVVCSDIQQDYKATKEREIFWLVDAPSYQWCNEHIPADLQAFLRFQDLSFERDRVEGIFQLQVNEWSDGNRGEQPLRSNLDNLNLHDLSELQFIWKGLPNFLILEKLRFVKLDTCRKLKNIFSVTIVRSLPKLESLKIINCEELEEIVSSNSEDEENHINQFVCFPELRYLEVMKCDKLKCLFDDCMVSHFPKLATLKIVKCSQLVYAFGLEHKAKHEGRGKCRRAKDARQVVLPKLEQVELVSLLNFTKICQGFKLQQPLKSSTALDCPKYSSSHSIYKG 1304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01065 1304 Gene3D Ribonuclease Inhibitor 510 754 IPR032675 -
Bva12g01065 1304 Gene3D - 299 385 IPR042197 -
Bva12g01065 1304 Pfam NB-ARC domain 159 387 IPR002182 GO:0043531
Bva12g01065 1304 SUPERFAMILY L domain-like 459 1228 - -
Bva12g01065 1304 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 7 1181 - -
Bva12g01065 1304 PANTHER - 7 1181 - -
Bva12g01065 1304 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 135 401 IPR027417 -
Bva12g01065 1304 Gene3D - 386 469 IPR036388 -
Bva12g01065 1304 PRINTS Disease resistance protein signature 334 348 - -
Bva12g01065 1304 PRINTS Disease resistance protein signature 169 184 - -
Bva12g01065 1304 PRINTS Disease resistance protein signature 241 255 - -
Bva12g01065 1304 PRINTS Disease resistance protein signature 623 639 - -
Bva12g01065 1304 Gene3D - 138 295 IPR027417 -
Bva12g01065 1304 Gene3D Ribonuclease Inhibitor 1052 1236 IPR032675 -
Bva12g01065 1304 Gene3D Ribonuclease Inhibitor 792 962 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01065 Bva-Chr12 10674336 10680174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01065 166 643 WRKY Transcription Factor Family AT5G45050 24.330 5.97e-11 65.5