Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01063 ATGGGAAGGGGAAGAGGAGCTGCGGCTGTTGACCTTAATGGATCCGGGTCGAGGACGGTTTTAAAAGAGCCTAGGTACCGGGGCGTGAGGAAGAGACCGTGGGGGAGATTCGCCGCCGAGATCAGAGACCCGTTGAAGAAAGCTCGGGTCTGGCTAGGCACCTTCGACTCGGCCGAGGAAGCGGCTCGAGCCTACGACGCCGCAGCTCGGACCCTACGTGGACCCAAAGCCAAAACCAATTTCCCTCTGTCCcactcttctctctctcctttctGTTACCATAACAACCAGAACGATCCCCTTTTAGATCAGCGGTGGTACGCCGCCAACGGTGGTTACCAAGAGCAGCAGATTAATCCCCAGAGACCCACCTCCAGCAGCATGAGCAGCACAGTCGAGTCCTTCAGCGGACCATGCCCTCCGTCGGCCACGGCGACGGCTGCCACAGTAACCGTACGGAGATATCCTCGTCCGCCTCCAGTCGTGCCTGAGGATTGCCACAGTGACTGCGATTCGTCATCATCGGTTGTTGACGACAACGGCGATATAACCTCATCTTCGTTTCGTCAACCGTTGCCGTTCGATCTTAATCTCCCACCGTTGGATGGTGTTGACTTGGAGGGTGATGATCTGCACTGCACCGCACTCTGCCTTTG 656 0.5564 MGRGRGAAAVDLNGSGSRTVLKEPRYRGVRKRPWGRFAAEIRDPLKKARVWLGTFDSAEEAARAYDAAARTLRGPKAKTNFPLSHSSLSPFCYHNNQNDPLLDQRWYAANGGYQEQQINPQRPTSSSMSSTVESFSGPCPPSATATAATVTVRRYPRPPPVVPEDCHSDCDSSSSVVDDNGDITSSSFRQPLPFDLNLPPLDGVDLEGDDLHCTALCL 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01063 218 MobiDBLite consensus disorder prediction 160 188 - -
Bva12g01063 218 Gene3D AP2/ERF domain 25 84 IPR036955 GO:0003700|GO:0006355
Bva12g01063 218 SUPERFAMILY DNA-binding domain 25 84 IPR016177 GO:0003677
Bva12g01063 218 ProSiteProfiles AP2/ERF domain profile. 25 82 IPR001471 GO:0003700|GO:0006355
Bva12g01063 218 MobiDBLite consensus disorder prediction 168 188 - -
Bva12g01063 218 CDD AP2 24 84 IPR001471 GO:0003700|GO:0006355
Bva12g01063 218 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 3 199 - -
Bva12g01063 218 SMART rav1_2 25 88 IPR001471 GO:0003700|GO:0006355
Bva12g01063 218 Pfam AP2 domain 24 74 IPR001471 GO:0003700|GO:0006355
Bva12g01063 218 MobiDBLite consensus disorder prediction 116 140 - -
Bva12g01063 218 PRINTS Ethylene responsive element binding protein signature 26 37 IPR001471 GO:0003700|GO:0006355
Bva12g01063 218 PRINTS Ethylene responsive element binding protein signature 48 64 IPR001471 GO:0003700|GO:0006355
Bva12g01063 218 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3-RELATED 3 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01063 Bva-Chr12 10664725 10665875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01063 1 218 AP2-EREBP Transcription Factor Family AT3G20310 59.514 3.75e-60 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva12g01063 AP2 1.4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01063 K09286 - pvy:116145234 263.462