Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01044 ATGGAAGAAATCTGCAAAGATAATGGATCAAACTCTCTTCCTTCAGTTATGTCGTTTAGTGGCAAACGACTAACCGTAGATGAGGTGGAATTCTTCTCcgaaaagaaacagaagaatGGTCATCAACATTATGATCATTTGGTGCAACCAACGGAGCTTCATCATCATGTAGATACTAGTTTAGATCTCCTTACAAAGCATAGCGGTAGCAACAAATCGATTGTGGATGATGGAGCTTCATACCCCATGGATGATAAGAGAAATGAGAAAAAGTTGGAAGCTTTGCTGGCTGAGTTGCACCAGACCAACGTTGAAAACCAGCGCTTGAGAGAGCTGGTTGATCAGGTCAACAATAGCTACAATGCCCTTCACATGAAGCTTACCACATTAATGCAGAGGGGACAGAGTAGCGGGGATAATGGAGCAGCTACAGGTGACAAGAGTGAGAAAGGAGGGATGATTCCAAGACCATTTATGGAAATGGATCTTGCTGGTTTTGCTAAAAAAGAAGAGGCTTCAGAAGGGAAATTTCCCAAAAGTGGAAAGTTTGAATTAATGGAGTGCAAGACTAGTCAGAAGATTTGTACCAGTAGTAGAGACAAGAAGGATGGTGGTGCAATTAAAGCAGTAGCAAGAAGGGAAGAGAGTCCAGAACAAGCAGCATTACCAGCCGGGTGGCTCTCTGGCAAAGACCCTAATTTGATCAATTCTTTTAGGGATGATCAAGCAACAGAAGCCATGTCAATGATGAAGAAAGCTCGTGTATCGGTTCGAGCACATTCGGAGGCTTCGATGATTCAAGATGGATGTCAATGGAGAAAGTATGGGCAGAAGATGGCCAAAGGAAACCCATGTCCACGAGCTTATTATCGTTGCACTATGGGGACTGGTTGTCCAGTTCGCAAACAAGTACAAAGGTGTGCAGAAGATCGAAGTGTGTTAATTACTACATATGAAGGGCAGCATAACCATCCACTTCCTCCTGCTGCCAAGGCAATGGCATCCACCACATCAGCAGCCACCTCAATGCTTCTTTCAGGATCAATGTCGAGCACAGATTGCCTAATGAACCCTAATATATTAGAAAGTGCTTCGCTTCCATGCTCACCGAACTTGGCAACCCTTTCAGCTTCAGCCCCATTTCCAACTATCACATTAGATCTCACTCAAAAGAATCCTAATGCTTCACAGCTCCAAAGGCCACAAGGCCAAGTACTGAGCTTGTTGCCTTCAACCTTGGCTCAGAAGTTCATGTCATCAGTTCCAGGCGTGTTGGGATCACAGGGATCATCAGAGACAGCTAATTCATTTGCAGACACAGTGAGTGCAGCAACGGCTGCTATCACCGCAGACCCGAATTTCGCAGCCGCTCTTGTGGCCGCCGTAACATCTATCATTGGTAGTTCACATTCAAACAGCAATGGTACCAATAATAATGCTAGTGGAAACCatcaatg 1457 0.4413 MEEICKDNGSNSLPSVMSFSGKRLTVDEVEFFSEKKQKNGHQHYDHLVQPTELHHHVDTSLDLLTKHSGSNKSIVDDGASYPMDDKRNEKKLEALLAELHQTNVENQRLRELVDQVNNSYNALHMKLTTLMQRGQSSGDNGAATGDKSEKGGMIPRPFMEMDLAGFAKKEEASEGKFPKSGKFELMECKTSQKICTSSRDKKDGGAIKAVARREESPEQAALPAGWLSGKDPNLINSFRDDQATEAMSMMKKARVSVRAHSEASMIQDGCQWRKYGQKMAKGNPCPRAYYRCTMGTGCPVRKQVQRCAEDRSVLITTYEGQHNHPLPPAAKAMASTTSAATSMLLSGSMSSTDCLMNPNILESASLPCSPNLATLSASAPFPTITLDLTQKNPNASQLQRPQGQVLSLLPSTLAQKFMSSVPGVLGSQGSSETANSFADTVSAATAAITADPNFAAALVAAVTSIIGSSHSNSNGTNNNASGNHQ 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01044 485 ProSiteProfiles WRKY domain profile. 261 327 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva12g01044 485 Coils Coil 92 119 - -
Bva12g01044 485 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 9 474 IPR044810 GO:0003700
Bva12g01044 485 MobiDBLite consensus disorder prediction 133 155 - -
Bva12g01044 485 PANTHER WRKY TRANSCRIPTION FACTOR 6-LIKE 9 474 - -
Bva12g01044 485 Pfam WRKY DNA -binding domain 267 325 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva12g01044 485 Gene3D WRKY domain 251 328 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva12g01044 485 SUPERFAMILY WRKY DNA-binding domain 259 327 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva12g01044 485 SMART WRKY_cls 266 326 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01044 Bva-Chr12 10571810 10574657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01044 28 479 WRKY Transcription Factor Family AT1G62300 45.272 1.58e-109 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva12g01044 WRKY 4.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01044 - - adu:107496306 404.445