Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01028 atggaagagggAACCTCCACTCTTGGatCTTCTTCTAATTGGTATACAGTTACATACATCATGGAAGGTATCATTGTGAGAAGAGTCATTCCCTCTGATAACAGTTGTCTTTTTAATGCTGTCGGGTATGTTATGGAccatgacaaaaataaagctCCTGAGTTGAGACAGATTATAGCAGCAACAGTAGCAAGTGATCCAGAGAAATATTCTGAAGCATTTCTTGGAAAGCCAAATGCAGAGTATTGTTCCTGGATACTTGACTCCAAGAAGTGGGGAGGTGCAATTGAGCTTTCCATATTAGCAGATTATTATGGACGTGAAATTGCAGCTTATGATATACAAACAACGCGATGTGATTTGTATGGCCAGGAAAGCAAGTATTCTGAAAGGGTTATGCTGATTTATGATGGTCTCCATTATGATGCATTAGCTATGTCTCCCTTTGAGGGGGCTCCCGAGGAGTTTGATCAGACTATATTTGCTGTACAGAAAAACAGAAGCATTGGACCTGTTGAGGGGCTTGTCCTTAACCTGGTTAAGGAACAACAGAGGAAACGTAGCTACACCGACACCGCCAACTTCACTCTGCGTTGTGGTGTGTGCCAAATTGGAGTAGTTGGCCAGAAGGAGGCAGTGGAACATGCACAAGCAACTGGCCATGTCAACTTTCAAGAATACAGATG 686 0.4096 MEEGTSTLGSSSNWYTVTYIMEGIIVRRVIPSDNSCLFNAVGYVMDHDKNKAPELRQIIAATVASDPEKYSEAFLGKPNAEYCSWILDSKKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQESKYSERVMLIYDGLHYDALAMSPFEGAPEEFDQTIFAVQKNRSIGPVEGLVLNLVKEQQRKRSYTDTANFTLRCGVCQIGVVGQKEAVEHAQATGHVNFQEYR 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01028 228 Gene3D - 12 193 - -
Bva12g01028 228 SUPERFAMILY Cysteine proteinases 24 144 IPR038765 -
Bva12g01028 228 ProSiteProfiles OTU domain profile. 25 147 IPR003323 -
Bva12g01028 228 Pfam OTU-like cysteine protease 32 125 IPR003323 -
Bva12g01028 228 PANTHER UBIQUITIN THIOESTERASE OTU1 14 226 - -
Bva12g01028 228 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 14 226 IPR039138 GO:0004843|GO:0016579|GO:0030433|GO:0101005
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01028 Bva-Chr12 10487498 10492322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01028 21 228 C2H2 Transcription Factor Family AT1G50670 84.615 1.27e-135 377