Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00994 ATGATTTGCTCAGTGAAGCAACCTGGGATAGCCATCAGCGGCTCTAATATTGTTTTTCgggaaaaatatggaaacCCAGTTCAGCAATGGTCACCTTTACCTTCTATTTCAAGTGAACGAACCCAGAGATCCATTGTTTCAGTGCAAAATCTCTCAGTTCAAAAACCTTTACACCTATCTTCTGTCGGAAATTTTGGATCTTTGAAACATcgaagaaaattaattgtttgtgAAGCTTACGAGGCGGACCGATCAGAGCCCATTGAATCACAGGCACCATCAGAGGCAGCTAAGAAGGTGAAAATTGGGATATACTTTGCAACCTGGTGGGCTTTGAATGTTGTCttcaatatttataacaagaaGGTTCTGAATGCATATCCCTACCCTTGGCTCACTTCAACTCTCTCACTTGCCTGTGGGTCTCTCATGATGTTGATCTCTTGGGCCACGAGGATAGCTGAGGCGCCAAAGACTGATTTTGAGTTCTGGAAGACTTTGTTCCCGGTTGCTGTTGCACATACAATTGGCCATGTAGCTGCAACGGTTAGTATGTCCAAAGTTGCAGTTTCATTCACTCATATCATCAAGAGTGGTGAGCCTGCTTTTAGTGTGCTGGTTTCAAGATTTCTTTTGGGTGAGACATTCCCAGTGCCAGTTTATCTGTCCTTAGTTCCAATTATCGGTGGTTGTGCTCTTGCGGCCGTGACCGAGCTCAATTTCAATATGACTGGTTTTATGGGAGCCATGATTTCTAATCTGGCATTTGTATTTCGaaacattttttcaaaaaagggGATGAAAGGGAAGTCTGTTAGTGGAATGAACTACTATGCTTGTTTGTCTATGTTGTCTCTCGCTATTCTCACGCCATTCGCAATTGCTGTGGAGGGACCACAGATGTGGGCGGCTGGATGGAAAACAGCCCTTTCTCAAATTGGACCGCAGTTCATATGGTGGGTAGCAGCTCAGAGCGTGTTCTATCATCTGTATAACCAGGTTTCATACATGTCTCTGGACGAGATCTCTCCCTTGACATTCAGCGTTGGAAACACCATGAAACGTATATCCGTCATAGTCTCTTCCATCATTATCTTCCACACACCAGTTCAGCCCGTCAATGCTCTCGGAGCTGCTATCGCAATCCTCGGAACCTTCTTGTATTCCCAGGCAAAGCAGTA 1181 0.4251 MICSVKQPGIAISGSNIVFREKYGNPVQQWSPLPSISSERTQRSIVSVQNLSVQKPLHLSSVGNFGSLKHRRKLIVCEAYEADRSEPIESQAPSEAAKKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEAPKTDFEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPVPVYLSLVPIIGGCALAAVTELNFNMTGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSMLSLAILTPFAIAVEGPQMWAAGWKTALSQIGPQFIWWVAAQSVFYHLYNQVSYMSLDEISPLTFSVGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFLYSQAKQ 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00994 393 PANTHER SOLUTE CARRIER FAMILY 35 50 393 - -
Bva12g00994 393 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC-LIKE 50 393 - -
Bva12g00994 393 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 101 392 IPR004696 GO:0016021|GO:0022857|GO:0055085
Bva12g00994 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 143 236 - -
Bva12g00994 393 Pfam Triose-phosphate Transporter family 101 389 IPR004853 -
Bva12g00994 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 292 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00994 Bva-Chr12 10334681 10338728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00994 1 392 Antiporters AT5G54800 77.307 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00994 K15283 - gmx:100801832 639.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g00994 12 10334681 10338728 Bva12g02779 12 20148469 20152152 BWGD