Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00976 ATGGACAACAAGGCTCAAGCTCGGTTCACGCTAGGGAGGCAGTCTTCCCTAGCGCCGGTGAGGGAGGATTCCGGGGTTGCTTCTGGTGGCGGCGATGATTATGGGTCGGAGGCGTTGGAACCTGCTGTGGGTTTGATGTACTTAGCAAATGAAGGGGACTTGGATGGAATTAAGGAGCTTGTGGACTCTGGGAGTGATGTTAATTTCAGGGACATCGATGGCCGCACAGCTTTGCATGTTGCTGCATGCCAGGGACTCACTGATGTTGTCGAATTGTTGCTACAAAAGGGTGCTGAGGTCGACCCACTGGACCGTTGGGGCAGCTCGCCTCTGGCAGATGCAATGTACTATAAAAATCATGATGTTGTCAAACTTTTGGAGAAACATGGTGCAAAACCTCCGATGGCTCCCATGCACGTGGAAAATGCTCGTGAAGTCCCAGAATATGAGATTGATCCTTCTGAACTAGATTTCACTAATAGTGTTCACATAACAAAGGGAACTTTTTGTATTGCATCATGGCGTGGAATTCAAGTTGCTGTTAAAACACTTGGGGAGGAAGTATTCACTGATGAGGATAAAGTAAAGGCATTTCATGATGAGCTCGCATTACTTCAGAAAATACGTCATCCAAATGTAGTGCAATTTTTAGGTGCTGTAACACAAAGCACCCCAATGATGATTGTCACAGAATATCTACCTCAGtTGTTACCTTTTCAGGGAGATCTTCGTGCCTACTTGAAGCCGAAAGGTGCACTAAGACCAACTACAGCTGTGAAGTTTGCACTTGATATAGCTAGGGGAATGAATTATTTGCATGAACATAGGCCGGAAGCCATCATACACCGAGATCTTGAACCTTCAAATATACTGCGGGATGATTCTGGGCATCTGAAAGTTGCAGACTTTGGGGTCAGCAAGTTGCTGAAAGTTACAAAAACAGTCAAAGAAGACAGACCTGTGACTTGCCAGGATACTTCatGGCGCTATGTGGCTCCAGAGGTCTACAGAAATGAGGAATATGATACCAAAGTGGATGTGTTTTCATTTGCTTTAATATTACAGGAGATGATCGAAGGCTGTCCGCCATTTTCTACAAATCCAGAAAATGAAGTTCCTAAGGCATATGCTGCAAATGAGCGTCCACCCTTGAAAGCTTCACCAAAGAATTATGCTTATGGCCTAAGAGAGTTGATTGAGAACTGCTGGGATGAAGAACCACACAGGAGACCAACATTCAGGCGAATAATTGAAAGATTAGAACGCATCAGCCACCACCTTGCTCAAAAGAGGAGCTGGAAGGCTACTTTCAGATGCCTTCTGTTTAATGGGAAAAGGACAAATCCAAGCAGTCGATCATCTCGctatacata 1373 0.4487 MDNKAQARFTLGRQSSLAPVREDSGVASGGGDDYGSEALEPAVGLMYLANEGDLDGIKELVDSGSDVNFRDIDGRTALHVAACQGLTDVVELLLQKGAEVDPLDRWGSSPLADAMYYKNHDVVKLLEKHGAKPPMAPMHVENAREVPEYEIDPSELDFTNSVHITKGTFCIASWRGIQVAVKTLGEEVFTDEDKVKAFHDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPQLLPFQGDLRAYLKPKGALRPTTAVKFALDIARGMNYLHEHRPEAIIHRDLEPSNILRDDSGHLKVADFGVSKLLKVTKTVKEDRPVTCQDTSWRYVAPEVYRNEEYDTKVDVFSFALILQEMIEGCPPFSTNPENEVPKAYAANERPPLKASPKNYAYGLRELIENCWDEEPHRRPTFRRIIERLERISHHLAQKRSWKATFRCLLFNGKRTNPSSRSSRYT 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00976 457 ProSiteProfiles Ankyrin repeat region circular profile. 73 105 - -
Bva12g00976 457 ProSiteProfiles Protein kinase domain profile. 100 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00976 457 Pfam Protein tyrosine and serine/threonine kinase 173 420 IPR001245 GO:0004672|GO:0006468
Bva12g00976 457 Pfam Ankyrin repeats (3 copies) 45 133 IPR002110 GO:0005515
Bva12g00976 457 CDD STKc_MAP3K-like 164 420 - -
Bva12g00976 457 SUPERFAMILY Protein kinase-like (PK-like) 164 424 IPR011009 -
Bva12g00976 457 SMART ANK_2a 106 135 IPR002110 GO:0005515
Bva12g00976 457 SMART ANK_2a 73 102 IPR002110 GO:0005515
Bva12g00976 457 SMART ANK_2a 40 69 IPR002110 GO:0005515
Bva12g00976 457 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 9 441 - -
Bva12g00976 457 Gene3D Transferase(Phosphotransferase) domain 1 240 440 - -
Bva12g00976 457 ProSiteProfiles Ankyrin repeat profile. 73 105 IPR002110 GO:0005515
Bva12g00976 457 PANTHER INTEGRIN-LINKED KINASE FAMILY PROTEIN 9 441 - -
Bva12g00976 457 PIRSF ILK 1 441 - -
Bva12g00976 457 Gene3D - 37 145 IPR036770 -
Bva12g00976 457 SUPERFAMILY Ankyrin repeat 44 136 IPR036770 -
Bva12g00976 457 Gene3D Phosphorylase Kinase; domain 1 150 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00976 Bva-Chr12 10239958 10244817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00976 6 443 MAP Kinase Kinase Kinase AT4G18950 66.970 0.0 598
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Bva12g00976 PK_Tyr_Ser-Thr 6.9e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00976 - - gmx:100795964 724.546