Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00964 ATGGATTTGGCATGTTTTGTCTTAtgggttttcttctttcccatAGCTGCAGTTgtctctttcaatttcttgagACACAAGAAAAGGTGTAACAGGAATCATAAGAAGCTGCCACCAGGGGAAATGGGGCTCCCATGGATAGGGGAGACCATGGAATTCTTCAATGCCCAGAAAAGAAACCAACTGTTTGAGGAGTTTGTTCAACCAAGAATCCGAAAACACGGGAAGATCTTCAAAACAAGGATCATGGGGTCTCCCACAGTGGTTGTGAATGGAGCTGAGGCCAACAGATTCTTCCTGTCCAACGAGTTCAAGTTGGTGAAAAGCTCTTGGCCATCTTCATCAGTTGAGCTCATGGGCAGGGAATCTATAATGGAGAAAGAAGGGGAAAGGCACCGTGTCCTGCGCGGCGTTATAGGAACCAGCCTTGGTTATGCAGGACTTGAGGTGCTGGTTCCCAAAATGTGCAACTCTGTTCAGTTGCATTTGGCATCAAACTGGCATGGCCAAGAAAGATTAAGCCTTTACTGGTCCGCGAAAGTGCTGACATTTAGCATAGTGTTTGAATGCTTGTTGGGCATCAATGTGGAGCCAGGGATGCTAGATACCTTTGAGAGAGTCTTGGAAGGAGTATTCTCTCCAGCAGTTATGTTCCCTGGCTCCAAGTTTTGGAGAGCAAAGAAAGCAAGgaaggaaatagaaaagatgTTGGTAAATGTGGTgagggagaagagaaagaaaatggaagaaaatctaGAAAGAGGAGAAGATGGAATGTTACTGTCTAGGTTGATAGCTGGGATGATACAAGGGGAAATTAGTGAACAAGAAGTTATAGATAATGTAGTTTTGCTGGTTTTTGCAGCACATGATACATCTTCTTTTGCCATTGCCATGACATTTAAGATGTTAGCTCAGCATTCTGATTGCTACAATAAACTCCTCCAAGAACATGTTGATATAATGAGCAGCAAAAGATGGGGTGAGAATCTGACATTGGAGGAtataaagaagatgaagtatACCTGGCAAGTTGCTAGAGAAAGTATGAGACTTTTCCCTCCTATCTTTGGCTCTTTCAGGAAGGCAATTGCTTATATTGACTATGAAGGATTCTCCATACCCAAAGGATGGAAGGTATTGTGGACAGCATATGGGACACATTACAATGAAGAGTATTTCAAAGATCCTATGAGTTTCAATCCAAATAGGTTTGAGGATTCAGTGCCACCATATGCATTTGTCCCCTTTGGAGGAGGGCCAAGAGTGTGTGCAGGTTACCAATTGGCCAAGCTTAACATTCTCATTTTTGTGCATTATGTCGTGACCCAATATGACTGGTCCTTACTGCACCCAGATGAACCAATCACTATGGATCCTCTGCCATTTCCTTCCCTTGGAATGCCCATCAGAGTTTTTCCAAAGCATTCATG 1433 0.4047 MDLACFVLWVFFFPIAAVVSFNFLRHKKRCNRNHKKLPPGEMGLPWIGETMEFFNAQKRNQLFEEFVQPRIRKHGKIFKTRIMGSPTVVVNGAEANRFFLSNEFKLVKSSWPSSSVELMGRESIMEKEGERHRVLRGVIGTSLGYAGLEVLVPKMCNSVQLHLASNWHGQERLSLYWSAKVLTFSIVFECLLGINVEPGMLDTFERVLEGVFSPAVMFPGSKFWRAKKARKEIEKMLVNVVREKRKKMEENLERGEDGMLLSRLIAGMIQGEISEQEVIDNVVLLVFAAHDTSSFAIAMTFKMLAQHSDCYNKLLQEHVDIMSSKRWGENLTLEDIKKMKYTWQVARESMRLFPPIFGSFRKAIAYIDYEGFSIPKGWKVLWTAYGTHYNEEYFKDPMSFNPNRFEDSVPPYAFVPFGGGPRVCAGYQLAKLNILIFVHYVVTQYDWSLLHPDEPITMDPLPFPSLGMPIRVFPKHS 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00964 477 PANTHER CYTOCHROME P450 26 26 474 - -
Bva12g00964 477 PRINTS P450 superfamily signature 288 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00964 477 PRINTS P450 superfamily signature 415 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00964 477 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00964 477 PRINTS P450 superfamily signature 424 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00964 477 Coils Coil 226 246 - -
Bva12g00964 477 Pfam Cytochrome P450 38 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00964 477 PRINTS E-class P450 group I signature 277 294 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00964 477 PRINTS E-class P450 group I signature 383 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00964 477 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00964 477 PRINTS E-class P450 group I signature 414 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00964 477 PRINTS E-class P450 group I signature 424 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00964 477 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 417 426 IPR017972 GO:0005506|GO:0016705
Bva12g00964 477 SUPERFAMILY Cytochrome P450 31 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva12g00964 477 PANTHER TAXADIENE 5-ALPHA HYDROXYLASE 26 474 - -
Bva12g00964 477 Gene3D Cytochrome P450 26 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00964 Bva-Chr12 10168403 10170258 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00964 6 380 Cytochrome P450 AT2G42850 63.351 2.35e-162 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00964 - - gmx:100793336 801.201