Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00961 ATGGCCATGGCGAAAACGGCAACTCCAACTTCTACGATTACCGAAAGGGTGAGCACCCAAAAGGTGGAACAAGCGGTGAATTCCCTCCTCAAATGGAGGGATTCCAAGTCCCAGCAGGAAAAGCCGAAGCTTTTTGAGCAAGACGACGAATTCCTTTACCTGATTCTCACCCTCAAGAAAATTCCTCAGAAGGGTCGTGTTAATCCTTACAAAATTGAGCTTCGACATTCTCTTCTCTCTGAATTCTCAGAGATCTGTTTGATCATCGACGACAGATCAAAGTCGAATCTCACCAAAGACGATGCCCAGAAGAAGATCAAGTCGGAGAATATTCCGGTTTCCAAGGTTTTGAAGCTCTCGAAGCTCAGGTCTAATTATCGTTCATTCGAGGCGAAGCGGAAGCTTCTTGATTCTTACCACATGTTTTTTACAGATAAAAGGGCTGTGCCACTGTTGCCGAAGCTATTGGGgaagcatttttttaagaagaagaagactcCGGTGCCTTTAAATTTGACGCATAAGAATTGGAAGGAGCAGATAGAGAGGACATGTTCATCTGCGTTGTTGTACCTAACGACAGGTAGTTGTTGTGTGGTGAAAGTTGCGAAAGTGGGAATGGAAAAGGATGAGATTGTTGAGAATGTGATTGCTGCTATTAATGGGGCTGTGGAAAATGTGCCTAAAAAGTGGGGGAATGTGCGTTCTCTTCATTTGAGGCTGTCGGAGTCGCTGGCTTTACCAATTTATCAGGCAGTTCCGGATGTGAAGTTGAAGATTGATGGAGTTAAGGACAAAGAACTTGAGGAGAAGGCGGAAGAGGCTGAAGAGAGTGGTAAGAAAGGGGATAAGAAGGATCAGAAAGTGGGTAAGAAGAAGGGGAGGATTCATGAAGTTAGGTACATGGATGATGCTGGTGAGGAGTTTAGTGAAGATGAGTCAGGTGGTCAAGATGATGGGGATATTGCAGAAGATGATAGTGAGAATGATGAAATGGGCAGTGGAAAATTAGTGgataagaagagaaagaaagcaagtaagaaaaaagtagGGGCTCTAACTGAGTTGAATAGTGTGAAGCGATTGAAAAAATCAGCAAAGGATAAGAGTACAGAGAGTACCAAACAGCAGAAAGATGGGTTGTCTGCCAAAGCgatgaaagaaaatgttaggAAGCAAAAGATGAAGGAATCGCCTGTTGAAGATggagagaagaagaacaagaagaaaagtggACTAACGAAGTTAGAAGGTGGAGATATGAAAGTGAAGGCTAAGAAAAGTAATAAGGCTGCTTA 1298 0.4014 MAMAKTATPTSTITERVSTQKVEQAVNSLLKWRDSKSQQEKPKLFEQDDEFLYLILTLKKIPQKGRVNPYKIELRHSLLSEFSEICLIIDDRSKSNLTKDDAQKKIKSENIPVSKVLKLSKLRSNYRSFEAKRKLLDSYHMFFTDKRAVPLLPKLLGKHFFKKKKTPVPLNLTHKNWKEQIERTCSSALLYLTTGSCCVVKVAKVGMEKDEIVENVIAAINGAVENVPKKWGNVRSLHLRLSESLALPIYQAVPDVKLKIDGVKDKELEEKAEEAEESGKKGDKKDQKVGKKKGRIHEVRYMDDAGEEFSEDESGGQDDGDIAEDDSENDEMGSGKLVDKKRKKASKKKVGALTELNSVKRLKKSAKDKSTESTKQQKDGLSAKAMKENVRKQKMKESPVEDGEKKNKKKSGLTKLEGGDMKVKAKKSNKAA 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00961 432 MobiDBLite consensus disorder prediction 271 432 - -
Bva12g00961 432 PANTHER RIBOSOMAL L1 DOMAIN-CONTAINING PROTEIN 1 13 313 - -
Bva12g00961 432 SUPERFAMILY Ribosomal protein L1 16 250 IPR023674 -
Bva12g00961 432 MobiDBLite consensus disorder prediction 360 432 - -
Bva12g00961 432 Pfam Ribosomal protein L1p/L10e family 41 244 IPR028364 -
Bva12g00961 432 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 13 313 - -
Bva12g00961 432 Gene3D - 190 247 - -
Bva12g00961 432 Gene3D - 85 187 IPR016095 -
Bva12g00961 432 CDD Ribosomal_L1 22 249 IPR028364 -
Bva12g00961 432 MobiDBLite consensus disorder prediction 305 328 - -
Bva12g00961 432 MobiDBLite consensus disorder prediction 271 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00961 Bva-Chr12 10161886 10163439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00961 138 240 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 29.126 1.03e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00961 K14775 - zju:107427461 413.305