Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00958 ATGGAAGCAGAAAAGGCAGAAACGTTAACCCAGCAAATCTCCACCACCGCCACACCTGCATTGCAGAGGAAAACAGAGCAAACCCAGAAAATCTCTGACATGGATATTGGAGTTCGCAAGTTAATGCACGGTTCCCGGCGTCGAAGCAGACGGTGTCGGCGAGAGCAGCGAAGCAGCGTGGAGCTGAAGGTGGAGCAGATAAAAGAGGTGATGAGTACGGCGAGAAATGATGATGGTGCTGGGAAGAACGAAGCAGGGTGCGttgggaaagaagaagaaggagaagacgAGAGGGAAGAGATAGAGAAGAAGATTGAGGCGTTGCAGAGGATTGTGCCTGGCGGGGAGGCATTAGGTGTAGACAAGCTGTTCGATGAAACGGCTGGGTATATAGTGACCTTGCAGTACCAAGTCAAAGCATTGAGAGCTCTTCAAAGCTTTTTTGAGAAGTTGGAGAAGGAGGGAACAAAGTTAGGAGGGTG 482 0.4772 MEAEKAETLTQQISTTATPALQRKTEQTQKISDMDIGVRKLMHGSRRRSRRCRREQRSSVELKVEQIKEVMSTARNDDGAGKNEAGCVGKEEEGEDEREEIEKKIEALQRIVPGGEALGVDKLFDETAGYIVTLQYQVKALRALQSFFEKLEKEGTKLGG 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00958 160 Coils Coil 91 111 - -
Bva12g00958 160 MobiDBLite consensus disorder prediction 71 100 - -
Bva12g00958 160 PANTHER TRANSCRIPTION FACTOR PAR1 4 157 - -
Bva12g00958 160 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 4 157 IPR044660 GO:0006355
Bva12g00958 160 MobiDBLite consensus disorder prediction 1 58 - -
Bva12g00958 160 MobiDBLite consensus disorder prediction 7 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00958 Bva-Chr12 10154233 10155147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00958 98 144 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 46.809 7.46e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00958 - - pvu:PHAVU_008G191400g 114.775