Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00949 ATGGATGAACCCCTTCTCCCGAAGACAGGAGTAGCAGCAGAATCAGTATCACCATTGCCCAGAAGAGAATTCCCCTCTTCTTACCTTGATCTCGGCCCTTCTCGTCTCCAATCTTCTGCTCGTCTCATCACCAATAAAGAAATCTTTCAGATAATTACCACTCCCAACACTCCTTATGCGAATCTCATTGCGAATTTGAACAGGAAACGCCAGATAATCCATCGTTCCCTCTCTGCTCCTTCCGTTTTCACTGGCATCAAGGATGATTTTCATGACCCAATTGATCCAAGAACAATCCGGGGATCATCGGATTTCCTTCATTGGGGTTATTTTGTATGTGGTCATTGGTGCTTTGGTGTACTTGGCAAGTGGGAATTTCAAAGGCACCACCACATTCAGGCCAGTGGATGCTGTTTACTTCACAATGGCTGCATTGCTGTGGGGACAATATCAGCGCATTTTCTTGAGGATTTAGATTGGGTTAATAGCTTTTATCTCTCTGTTACTTCTGTCACAACTGTTGGTTATGGGGACTATGCCTTCACCACTGTCACAGGAAGATGTTTTGCCATTATATGGCTTTTGaagaagattacGATATCAGATTTAGTTTCTGCAGACCTTGATAATGATGGATCAATCAGCAAGGCTGAATTTGCCATATACAAGCTTAAGGAGATGGGAAAGATAACTGACTTAGACATTCAGCAACTAAGCAGACAATTTGATTCTATGGACACTAGAAAATGTGGCAAGCTTACTCTTGCTGACATTATGGAACCAGTCTA 788 0.4226 MDEPLLPKTGVAAESVSPLPRREFPSSYLDLGPSRLQSSARLITNKEIFQIITTPNTPYANLIANLNRKRQIIHRSLSAPSVFTGIKDDFHDPIDPRTIRGSSDFLHWGYFVCGHWCFGVLGKWEFQRHHHIQASGCCLLHNGCIAVGTISAHFLEDLDWVNSFYLSVTSVTTVGYGDYAFTTVTGRCFAIIWLLKKITISDLVSADLDNDGSISKAEFAIYKLKEMGKITDLDIQQLSRQFDSMDTRKCGKLTLADIMEPV 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00949 262 Pfam Ion channel 146 199 IPR013099 -
Bva12g00949 262 Gene3D - 207 261 - -
Bva12g00949 262 SUPERFAMILY Voltage-gated potassium channels 120 198 - -
Bva12g00949 262 SUPERFAMILY EF-hand 206 260 IPR011992 -
Bva12g00949 262 Gene3D - 134 206 - -
Bva12g00949 262 PANTHER OS01G0696100 PROTEIN 143 195 - -
Bva12g00949 262 ProSitePatterns EF-hand calcium-binding domain. 207 219 IPR018247 -
Bva12g00949 262 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 143 195 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bva12g00949 262 PANTHER OS01G0696100 PROTEIN 194 257 - -
Bva12g00949 262 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 194 257 IPR003280 GO:0005267|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00949 Bva-Chr12 10102039 10103583 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00949 144 260 Ion Channels AT4G18160 47.973 2.27e-36 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00949 K05389 - jre:109019999 183.341