Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00947 ATGGAGAAGGACAAGGATCATTTTAACTATGATCCCTTCTGTTACAACCACCATGAACTCAACCATACAAGCTTTCCATTCTTTAGAGATCACAGCCATTCAACGCCAACCCAAAACTTTCAAGGGTTTGATCCCTCTCTTACAAGCTTCACAGACTGTTTACATCGCTCCATGGACTACAACACCCTCTCAAGAGCTTTTGACTTGTCTTGCACATCCCCTGAAGTGATCTCTTCCATTGATGACAACCCAAAGAAGCCCTGCACGGGAGATTCAGTGAGGATCATCAGCAGGAACCCCGGCACGCCGAATTCCTCGGTGTCTTCATCATCAAATGAGGGCGCTGAAGCAGTGACACAAGAAGATTCATCAGCTAAGAGCAAGAAAGATAAGCAGCCAAAAGGGGATGATGATGCAGATGCAGATGAAAAGTCTAAGACACAGAAcaagccaaaaaagaaagagaaaaagcctAGAGAGCCTCGCGTTGCCTTCATGACCAAAAGTGAGATTGATCATCTTGAAGATGGATACCGCTGGAGAAAATATGGACAGAAAGCAGTCAAGAATAGCCCTTACCCAAGGAGCTACTACAGATGCACAAGTCAGAAGTGCATTGTGAAGAAAAGGGTAGAGAGGTCTTTCCAAGACCCATCAATTGTTATCACAACATACGAAGGACAGCACAACCATCACTATCCGGCAACACTTCGTGGCAATGCTGCAAGCATGTTGTCCTCAccttccattttttcttcctcatcTTTAGGGTCAAGCTTACCCCATGATCTTCTTGCTCAGTTGCTTCCAAGTTACTCTCAATATGATCAAAATTCCATGTTCCACCAAAACATTACCCATCCCCAGCAACACCAACACCAACaccaacagcagcagcagcagttTCCATTCCACCATGACTATGGCTTGTTGCAAGATCTATTACCCCATTCCCTGGAAAACAAGAGCCATGAATA 977 0.4166 MEKDKDHFNYDPFCYNHHELNHTSFPFFRDHSHSTPTQNFQGFDPSLTSFTDCLHRSMDYNTLSRAFDLSCTSPEVISSIDDNPKKPCTGDSVRIISRNPGTPNSSVSSSSNEGAEAVTQEDSSAKSKKDKQPKGDDDADADEKSKTQNKPKKKEKKPREPRVAFMTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCIVKKRVERSFQDPSIVITTYEGQHNHHYPATLRGNAASMLSSPSIFSSSSLGSSLPHDLLAQLLPSYSQYDQNSMFHQNITHPQQHQHQHQQQQQQFPFHHDYGLLQDLLPHSLENKSHE 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00947 325 MobiDBLite consensus disorder prediction 122 149 - -
Bva12g00947 325 MobiDBLite consensus disorder prediction 76 166 - -
Bva12g00947 325 PANTHER WRKY TRANSCRIPTION FACTOR 71-RELATED 17 318 - -
Bva12g00947 325 Pfam WRKY DNA -binding domain 175 231 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva12g00947 325 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 17 318 IPR044810 GO:0003700
Bva12g00947 325 SMART WRKY_cls 174 233 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva12g00947 325 MobiDBLite consensus disorder prediction 95 121 - -
Bva12g00947 325 Gene3D WRKY domain 161 227 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva12g00947 325 ProSiteProfiles WRKY domain profile. 169 234 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva12g00947 325 SUPERFAMILY WRKY DNA-binding domain 166 234 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00947 Bva-Chr12 10089508 10091860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00947 5 316 WRKY Transcription Factor Family AT4G18170 43.769 7.14e-66 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva12g00947 WRKY 2.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00947 - - aprc:113847247 392.889