Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00946 ATGTCAAGTAGTTCTTTGAATGTGGAATTGTCGAAGAAGACATCATTTTTGGGTTTGAAACTATGGGTTTTGATTGGCATAGGTGTTGGTGTATTTATTGTGCTTATTCTTTGTATATTATCTATATGGGTGATGTTTCGGAGGAAATCTAGGAAATCTCTGGACAAGTACTGTTTATCCCAGATACCAAATGTCTCAAAAGACATCAAGGTTGACAAAGTTGGGGTGCAGAATTCTCATGATCACCCAGAAAGTGTATTTATTCCTGTTCATGACAAGTCAAGTGACAAGAATTCAGAGAAGATGTTAGTTCATTTGGGTATAAGCAAATCCAGTGACCCTGACAATATGAGTCAGTGCAGCTCAATTTATCATCATGAGAGGGCAGGAAGTTCAATGTCTGGGGAAGAAGGAAGCTCTGGGACTGTTAAGAAGCAATCTACATTGTCACATGGAGGGCTTGTGACTGCCTCTCCTCTGATTGGCTTGCCAGAATTTTCTCATCTTGGATGGGGCCACTGGTTTACACTTAGGGATCTGCAACTTGCAACTAATCGTTTCTCATCAGAGAATGTGATTGGTGAAGGTGGATATGGGGTTGTTTATAAGGGCAGACTGATCAATGGAACGGAGGTGGCAGTGAAGAAGCTTCTGAATAACTTGGGACAAGCAGAGAAAGAATTTAGTGTGGAAGTGGAAGCCATAGGTCATGTTCGACACAAAAATCTTGTTCGATTGCTTGGATATTGCATAGAAGGAGTTCacagGCTGCTGGTGTATGAATATGTCAATAATGGTAACTTAGAACAATGGTTACATGGGGCAATGCACCAACACGGGACACTTACCTGGGAGGCCCGCATGAAAGTTTTACTTGGCACAGCTAAAGCGCTTGCTTACTTACATGAAGCAATAGAACCAAAAGTTGTTCATCGGGACATAAAGTCCAGCAACATACTGATTGATAATGAGTTCAATGCCAAGGTTTCTGATTTTGGATTGGCCAAACTTTTGGATTCCGGAGAAAGCCACATAACCACTAGAGTAATGGGAACATTTGGttATGTAGCACCAGAATATGCTAACACTGGTCTGTTGAATGAGAGGAGTGACATTTATAGCTTTGGTGTACTCTTGCTAGAAGCAGTCACCGGAAGGGACCCGGTAGACTATGCGCGCCCTGCTAATGAGGTTAATCTTGTGGAATGGCTAAAGATTATGGTGGGCACAAGAAGAGCAGAGGAAGTTGTGGATCCAAGCCTTGAAGTTAAACCCCCAACGCGTGCCTTAAAACGTGCCCTTCTGGTTGCTCTTAGGTGTGTTGATCCTGATGCAGAAAAGAGACCCAAAATGAGTCAGGTTGTGAGGATGCTCGAAGCCGACGAATATCCATTCCGAGAGGATCGAAGGAATCGAAAGAGCCGCACAACCAGCATGGAAATTGATTCCATGAAGGACATTTCTGGTCCATCTGAAGCAGAAAACAGGGTGGGAGATTCTGAAATCCATGTACCAGAAACAACTCAAGGATA 1532 0.4295 MSSSSLNVELSKKTSFLGLKLWVLIGIGVGVFIVLILCILSIWVMFRRKSRKSLDKYCLSQIPNVSKDIKVDKVGVQNSHDHPESVFIPVHDKSSDKNSEKMLVHLGISKSSDPDNMSQCSSIYHHERAGSSMSGEEGSSGTVKKQSTLSHGGLVTASPLIGLPEFSHLGWGHWFTLRDLQLATNRFSSENVIGEGGYGVVYKGRLINGTEVAVKKLLNNLGQAEKEFSVEVEAIGHVRHKNLVRLLGYCIEGVHRLLVYEYVNNGNLEQWLHGAMHQHGTLTWEARMKVLLGTAKALAYLHEAIEPKVVHRDIKSSNILIDNEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNERSDIYSFGVLLLEAVTGRDPVDYARPANEVNLVEWLKIMVGTRRAEEVVDPSLEVKPPTRALKRALLVALRCVDPDAEKRPKMSQVVRMLEADEYPFREDRRNRKSRTTSMEIDSMKDISGPSEAENRVGDSEIHVPETTQG 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00946 510 Coils Coil 207 227 - -
Bva12g00946 510 PANTHER RECEPTOR-LIKE KINASE PLANT 2 506 - -
Bva12g00946 510 ProSiteProfiles Protein kinase domain profile. 187 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00946 510 SUPERFAMILY Protein kinase-like (PK-like) 171 461 IPR011009 -
Bva12g00946 510 PANTHER OS01G0323000 PROTEIN 2 506 - -
Bva12g00946 510 CDD STKc_IRAK 193 459 - -
Bva12g00946 510 SMART serkin_6 187 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00946 510 ProSitePatterns Protein kinases ATP-binding region signature. 193 216 IPR017441 GO:0005524
Bva12g00946 510 Gene3D Phosphorylase Kinase; domain 1 169 262 - -
Bva12g00946 510 MobiDBLite consensus disorder prediction 465 510 - -
Bva12g00946 510 ProSitePatterns Serine/Threonine protein kinases active-site signature. 309 321 IPR008271 GO:0004672|GO:0006468
Bva12g00946 510 Gene3D Transferase(Phosphotransferase) domain 1 263 476 - -
Bva12g00946 510 Pfam Protein kinase domain 188 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00946 510 MobiDBLite consensus disorder prediction 465 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00946 Bva-Chr12 10079417 10083593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00946 18 461 Trihelix Transcription Factor Family AT1G70460 39.333 8.69e-95 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Bva12g00946 Pkinase 1.5e-48 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g00946 12 10079417 10083593 Bva12g02828 12 20417361 20418029 BWGD