Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00931 ATGGCTATGTCTTCTACTTCTTTCAGCTTCTTACCATTCTCttgtctgttttttttttgcttctttaccagttctgtttctgttttttcatttcctttgtcTCTGAGAAGGCAAGCTTCAATCTTGGTTTCCCTTAAACAAGATTTTGGAGCTGTGAATTCTTCTCTGAGCAGCTGGGATATGTCTAACTACTTTTCACTTTGCACCTGGAATGGCATAAAATGTGACTTCAAGAACAGGACAGTGGTGTCTCTTGACGTATCCAATTTGAACGTTTCTGGGTCACTTTCTGCTTCCATCACAAAGCTCCGTGGCCTTGTTGAGGTTTCGGTTGCGGGAAACAGCTTTTCCGGCGAGTTTCCTAGGGATATTCAGAGGTTGGGAAGGCTAAGATTCCTCAACATATCCAACAACATGTTTGGTGGGAATTTGAGCTGGGAATTCGCTGAAATGAAAGAGCTTGAAGTGCTTGATGCTTACAACAACAATTTCAATGGGTCGCTTCCTCTTGGGGTCACTGAGCTCCCCAAGCTCAAGTACTTGAATTTTGGCGGGAATTACTTTTCCGGGAAAATCCCACCAAGCTACGGGAAAATGGTGCAGCTCAAGTATCTTTCTGTTGCAGGAAATGACTTGGAGGGAATCATACCCAGTGAGCTTGGGAACCTTAGAAATCTGACCCAGCTTTATTTGGGATATTACAATCAATTTGATGGTGGAATCCCGAGTGATTTTGGGAAGCTCATAAATTTGGTTCATCTAGACCTTGCAAACTGTGGGTTGAAAGGTCCAATTCCAGCAGAGTTGGGGAACTTAGTAAAATTGGACACACTTTTCTTGCAAACCAATCAACTTTCCGGTTCAATTCCTCCCCATTTGGGGAACTTAAGTGCCTTGAAATCTCTTGATCTTTCTAACAATGAGCTCACTGGGGACATTCCAATTGAGTTCTCAGGCCTAAAAGAGCTTACCCTTTTGAACTTGTTCATGAACAAGCTACATGGGGAGATTCCAGCTTTTATTACGGAGTTGCCTAATCTGCAAGTTTTGAAGCTTTGGCACAACAACTTCACTGGGGCAATCCCTTCAAAGCTTGGCCAAAATGGGAAACTTTTTGAGCTTGACTTGTCAACAAATAAGCTCACTGGATTGGTTCCTAAGTCTCTTTGCCTTGGGAAGAGGCTCAAGATCTTGATCTTGCTcaataattttctgtttggatCTTTGCCTGCTGAGCTTGGCCAATGCTATTCACTCATAAGGGTTCGCCTTGGACAGAACTACTTGACAGGATCAATACCAAAAGGGTTTCTTTACCTGCCCGAGCTCTCACTTTTGGAGTTACAGAACAATTATCTCAGTGGTGGCCTTCCTCGAGAAACAAGCAATGCATCTTCAAAACTTGGACAGTTAAATCTCTCCAACAATCGGCTTTCGGGGTCTCTACCGGTATCCATTGGGAATTTCCCCAGCTTGCAAATTCTTCTGCTGAGTGGAAATAGATTCTCAGGAGAAATTCCACCAGATATAGGGAGGTTGAAGAATATccttaaatttgatatgagTAGAAACGACGTCTCAGGTAGCATTCCTGCTGGGATAGGTAACTGTGTCTTGCTTACCTATTTAGATTTGAGCCAAAACCAGTTATCAGGTCCTATTCCAATTCAGCTCTCTCAAATTCATGtgttaaattatcttaatgtCTCATGGAACCACTTAAACCAAAGCATTCCCAGGGAACTTGGCACCATGAAGGGATTAACTTCTGCAGATTTTTCTCACAACAACTTATCTGGTTCAATTCCTGAGAATGGCCAATTCTCAGTCTTCAATTCCACATCCTTTGTGGGTAACCCTCATCTATGTGGATATGACTTGAATCCCTGCAATCAATCATCAAATTGGCTCTTAGAACCTCGCGGCAACACGGGCACAAGATCAGGACTTTCTGGGAAATTCAAGCTTGTTTTTGCATTGGCACTGTTAGCGTGTTCATTTGTGTTTGCGACATTGGCCATTATCAAGAGCAGAAAGGCAAGGAAGCATTCAAACTCATGGAAGCTCACAGCATTCCAGAAGCTAGAATATGGAAGTGAAGACATCTTAGGGTGCATAAAGGAAGGAAATATAATAGGAAGAGGAGGAGCTGGAGTTGTTTACAGAGGAACCATGCAAAATGGAGAGCAAGTAGCAGTGAAGAAGCTCTTGGGAATCAACAAAGGCTCTTCTCATGACAATGGCCTCTCTGCAGAAATTAAGACACTGGGTAAAATCAGACACAGATACATTGTGAGGTTGCTAGCATTTTGTTCCAACAGAGACACCAATCTACTTGTTTATGAGTACATGCCAAATGGAAGTTTGGGTGAAGTGTTGCATGGGAAAAGAGGTGAGTTTCTCAAGTGGGATACAAGGCTCAAAATAGCCACAGAAGCAGCAAAAGGGCTTTGTTATTTGCACCATGATTGCTCTCCCCTAATCATCCATAGAGATGTTAAGTCAAACAATATACTATTGAGCTCTGATTTTGAAGCTCATGTTGCTGATTTTGGGCTTGCCAAGTTCTTGCAAGACACTGGGACTTCAGAGTGCATGTCTTCCATTGCAGGCTCTTATGGCTACATAGCTCCAGaatatGCATATACATTGAAAGTTGATGAAAAAagtgatgtttatagttttggagttGTACTTTTGGAACTCTTAACTGGGCGAAGACCAGTAGGTGATTTCGGAGAAGAAGGGCTAGACATTGTTCAATGGACAAAGAACCAAACAAATTGGAACAAAGATAAAGTGATGATGATCTTTGACGAGAGGCTGCATAATGTTCCTTTGGATGAAGTAAAGCAGGTATTCTTTGTGGCCATGTTATGTGTTCAGGAACACAGCGTGCAGAGACCAACCATGAGAGAAGTTGTTGACATGCTTGCACAAGCAAAGCAACCAAACACATTTCACATGCAGTG 2972 0.4092 MAMSSTSFSFLPFSCLFFFCFFTSSVSVFSFPLSLRRQASILVSLKQDFGAVNSSLSSWDMSNYFSLCTWNGIKCDFKNRTVVSLDVSNLNVSGSLSASITKLRGLVEVSVAGNSFSGEFPRDIQRLGRLRFLNISNNMFGGNLSWEFAEMKELEVLDAYNNNFNGSLPLGVTELPKLKYLNFGGNYFSGKIPPSYGKMVQLKYLSVAGNDLEGIIPSELGNLRNLTQLYLGYYNQFDGGIPSDFGKLINLVHLDLANCGLKGPIPAELGNLVKLDTLFLQTNQLSGSIPPHLGNLSALKSLDLSNNELTGDIPIEFSGLKELTLLNLFMNKLHGEIPAFITELPNLQVLKLWHNNFTGAIPSKLGQNGKLFELDLSTNKLTGLVPKSLCLGKRLKILILLNNFLFGSLPAELGQCYSLIRVRLGQNYLTGSIPKGFLYLPELSLLELQNNYLSGGLPRETSNASSKLGQLNLSNNRLSGSLPVSIGNFPSLQILLLSGNRFSGEIPPDIGRLKNILKFDMSRNDVSGSIPAGIGNCVLLTYLDLSQNQLSGPIPIQLSQIHVLNYLNVSWNHLNQSIPRELGTMKGLTSADFSHNNLSGSIPENGQFSVFNSTSFVGNPHLCGYDLNPCNQSSNWLLEPRGNTGTRSGLSGKFKLVFALALLACSFVFATLAIIKSRKARKHSNSWKLTAFQKLEYGSEDILGCIKEGNIIGRGGAGVVYRGTMQNGEQVAVKKLLGINKGSSHDNGLSAEIKTLGKIRHRYIVRLLAFCSNRDTNLLVYEYMPNGSLGEVLHGKRGEFLKWDTRLKIATEAAKGLCYLHHDCSPLIIHRDVKSNNILLSSDFEAHVADFGLAKFLQDTGTSECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELLTGRRPVGDFGEEGLDIVQWTKNQTNWNKDKVMMIFDERLHNVPLDEVKQVFFVAMLCVQEHSVQRPTMREVVDMLAQAKQPNTFHMQ 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00931 990 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3 15 987 - -
Bva12g00931 990 Pfam Leucine rich repeat N-terminal domain 38 76 IPR013210 -
Bva12g00931 990 Gene3D Ribonuclease Inhibitor 343 636 IPR032675 -
Bva12g00931 990 SUPERFAMILY L domain-like 313 633 - -
Bva12g00931 990 SMART LRR_typ_2 489 513 IPR003591 -
Bva12g00931 990 SMART LRR_typ_2 369 391 IPR003591 -
Bva12g00931 990 SMART LRR_typ_2 296 319 IPR003591 -
Bva12g00931 990 SMART LRR_typ_2 344 368 IPR003591 -
Bva12g00931 990 SMART LRR_typ_2 272 295 IPR003591 -
Bva12g00931 990 SMART LRR_typ_2 199 223 IPR003591 -
Bva12g00931 990 SMART LRR_typ_2 561 585 IPR003591 -
Bva12g00931 990 SMART LRR_typ_2 440 464 IPR003591 -
Bva12g00931 990 Gene3D Ribonuclease Inhibitor 146 238 IPR032675 -
Bva12g00931 990 Pfam Protein kinase domain 708 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00931 990 SUPERFAMILY Protein kinase-like (PK-like) 700 978 IPR011009 -
Bva12g00931 990 ProSiteProfiles Protein kinase domain profile. 706 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00931 990 Gene3D Transferase(Phosphotransferase) domain 1 784 989 - -
Bva12g00931 990 ProSitePatterns Serine/Threonine protein kinases active-site signature. 828 840 IPR008271 GO:0004672|GO:0006468
Bva12g00931 990 PANTHER UNNAMED PRODUCT 15 987 - -
Bva12g00931 990 SMART serkin_6 706 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00931 990 Pfam Leucine rich repeat 274 333 IPR001611 GO:0005515
Bva12g00931 990 Gene3D Ribonuclease Inhibitor 37 145 IPR032675 -
Bva12g00931 990 Gene3D Phosphorylase Kinase; domain 1 675 783 - -
Bva12g00931 990 SUPERFAMILY RNI-like 84 419 - -
Bva12g00931 990 Gene3D Ribonuclease Inhibitor 239 342 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00931 Bva-Chr12 9989092 9993502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00931 22 980 Receptor kinase-like Gene Family AT5G65700 59.148 0.0 1116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva12g00931 Pkinase 2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00931 - - gmx:100816158 1554.27