Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00913 ATGCTTAATCTTCACATTGCAAGATTATCTCCATCATCAACCTCATGCTGGAAAACAACCCTTCCCCACCAGAATACTTTCCTcagtttcaatttcttctcttcttcgaGGTTGTCTGAACCAAAATTCCCAAAAATTCAGCAACAACgagaagaacaagagaaaaatgacTCCTTTACGGTATCGTACCTCAGAAATTCATGTGGATTATCACCCAAATTAGCTATTGAAGCATCCAAAAGGGTGCGATTGAGAGATACAACCAACCCAGATTCCGTGCTTAATCTTCTTCGGAACTACGGATTTTCCAAAACCCACATTTCGAAACTCGTAGGAAGACGCCCCAGAGTGCTCTTAGCAAATCCTGAGACGACCCTTTTGCCCAAGCTTGCATTTTTCCGTTCTATTGGGCTTTCATCCATTGACATCCCAGAACTCATCAGTGATGCTCCAAAGCTCGCAGAATGCAGCCTAAAGAAAGCTTTAATCCCCCGTTATGAGGTACTTAGGAGTGTTTTTGTTGATGACGGTGAGATAGTACTTAAGATTATCAAGTACTCAAAAAACTTTTCTAATGCTTCATATGATAGAAATTTACTCCCCAACATTGAGGTTTTGAGACAAGCTGGAGTGCCTCAATCTTCTATCTCTTTTTTGGTTACTAATTATTCACAGATAGCTTTTACTAAGCATAAAAAGTTCCTTGAATGTGTCAACTCCGCTGAGGAAATGGGACTTGACCCTTCAAGAATAACATTTATTGAGATGGTCCAGTACCTAATAAGGATGAAGAAATCAAACTATGAAGCTAAATTGCGTGTCTATGAGAGATGTGGTTGGTCCAAGGATGTCACTATTTTAGCATTCAAAAGGTTTCGAACTTGTATGTCGTATTCAGAGgagaaaatcacaaaaatgtTTAAGATTCTTGTTGATGAAATGGGTTGGTCATCAGAAGATATTGCAATAAGCCCAATGATTCTCAGCTACAGCTTGAAGAAGAGGATTATCCCCAGATGTTCAGTggtgaaaattttgagattgaaGGGTTTGGTCAAGAAGGAATTGAGCTTAACTTCGTTTATTACCATTGATGAGAAGAAGTTTTTAGACAGATACGTGATCCGGTTTCTGGAAGATGTTCCTCAGTTGATGGAAATTTATAATGGCCAAATTGATCCTCTGTGTGGAATGCAGTCTTA 1202 0.3669 MLNLHIARLSPSSTSCWKTTLPHQNTFLSFNFFSSSRLSEPKFPKIQQQREEQEKNDSFTVSYLRNSCGLSPKLAIEASKRVRLRDTTNPDSVLNLLRNYGFSKTHISKLVGRRPRVLLANPETTLLPKLAFFRSIGLSSIDIPELISDAPKLAECSLKKALIPRYEVLRSVFVDDGEIVLKIIKYSKNFSNASYDRNLLPNIEVLRQAGVPQSSISFLVTNYSQIAFTKHKKFLECVNSAEEMGLDPSRITFIEMVQYLIRMKKSNYEAKLRVYERCGWSKDVTILAFKRFRTCMSYSEEKITKMFKILVDEMGWSSEDIAISPMILSYSLKKRIIPRCSVVKILRLKGLVKKELSLTSFITIDEKKFLDRYVIRFLEDVPQLMEIYNGQIDPLCGMQS 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00913 400 Pfam mTERF 94 251 IPR003690 GO:0003690|GO:0006355
Bva12g00913 400 Pfam mTERF 254 370 IPR003690 GO:0003690|GO:0006355
Bva12g00913 400 SMART mt_12 181 212 IPR003690 GO:0003690|GO:0006355
Bva12g00913 400 SMART mt_12 108 139 IPR003690 GO:0003690|GO:0006355
Bva12g00913 400 SMART mt_12 144 175 IPR003690 GO:0003690|GO:0006355
Bva12g00913 400 SMART mt_12 251 281 IPR003690 GO:0003690|GO:0006355
Bva12g00913 400 SMART mt_12 318 352 IPR003690 GO:0003690|GO:0006355
Bva12g00913 400 SMART mt_12 286 317 IPR003690 GO:0003690|GO:0006355
Bva12g00913 400 SMART mt_12 217 247 IPR003690 GO:0003690|GO:0006355
Bva12g00913 400 PANTHER CGI-12 PROTEIN-RELATED 24 391 IPR003690 GO:0003690|GO:0006355
Bva12g00913 400 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 24 391 - -
Bva12g00913 400 Gene3D Transcription termination factor 3, mitochondrial 150 381 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00913 Bva-Chr12 9876139 9878301 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bva12g00913 mTERF 5.2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00913 K15032 - qsu:112035834 347.821