Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00907 ATGGGTGGGGTAAAAAATGGTGAGATCACCGTGAGTGTGACAAAGGAAGAGGTGGTGACGGCAGTGTTGCCACTGCAAGAACATTGGCTGCCACTCTCAAACCTCGACCTTCTTCTCCCTCCGGTGGACGTCGGAGTATTCTTCTGCTACAAGAATCCAGCTGCCGCCACCGGAGGGGATGGCGATGGCTCTATGAGCTTTGGTTCCATGGTGGAGTCTCTGAAAAAGGCCTTGGCTCGGGCTCTCGTGTCCTTCTATGTCTTTGCAGGTGAGGTGGTGCTAAATTCAGCGGGTGAACCTGAGCTGCTCTGCAATAATAGTGGGGTTGATTTTGTGGAAGCCTTTGCCAACATGGAGCTGCAATCATTGAACTTGTATAATCCTGATGATACCGTTGAAGGCAAGCTTGTTCCTCAGAAGAAGCGTGGCATTTTAGCTGTCCAGGCAACTTCCCTCAAGTGTGGTGGGTTGGTAGTTTCATGCACATTTGACCATCGAATAGCCGATGCTTACTCAGCCAACATGTTCCTCGTATCATGGGCCAAAACGGCCCAGCCCACCGAGCCCAGAATCATTCACACTGCTCCTCCGTGCAAGCCATGTTTCCGGTGCTCTCTGCTCAGCCCTCGCCGCCCTGGTTCTATCCACCCCTCTCTCAACGACATGTACGTCCCCATGTCTATGCTTTCTCCGAGGAAGGAACTGGAAACAACCTCGGAGCCCGACCATCTGATCAGTCGGATATACTATGTCACGGTCGAAGAACTCGGCCACATGCAATCACTTGCAAACTCAAACCCTATCAATGGGGCAAAGCGCACTAAACTAGAATCTTTCTGTGCATTCTTGTGGAAGATGGTTGCTGCCAGTGCCATGGGCAAAAGGGTCAATGTCAAAATGGGAATTGTAGTTGATGGAAGGAAGAGGTTAAGCAATGGAGACAAAGACAAAGAAGCACTTATGGGTTCTTATTTTGGAAACGTGCTTTCCATTCCCTTTGGTGGGAAGCTAGTGGAAGAGCTTCTTGAAAAGCCATTGAGTTGGGTGGCCGGTGAAGTTCATCAGTTCTTAGAAACGGCGGTGGCAGAAGAGCATTTCTTAGGCCTTATTGATTGGGTAGAGGCTCACCGGCCGGTGCCCGGTTTGGCCAAGATATATAGTCATGGCAGTGAAGATGGACCTGCTTTTGTGGTTTCTTCCGGGCTAAGGTTCCCGGAATCTGAGGTGGATTTTGGGTGGGGGAAGCCGGTTTTCGCGTCGTACCATTTCCCATGGGGCGGTGATGCTGGCTATGTCATGCCGATGCCAAGCCCAGCTGGGAATGGTGACTGGGTGGTTTACATGCACCTTCTAAAGGTGCAGGTGGAGATGATTGAATCTAAGGCTGGTCATGTCTTTAAACCTTTGACTTGGGATTATCTTAAATATTG 1430 0.5035 MGGVKNGEITVSVTKEEVVTAVLPLQEHWLPLSNLDLLLPPVDVGVFFCYKNPAAATGGDGDGSMSFGSMVESLKKALARALVSFYVFAGEVVLNSAGEPELLCNNSGVDFVEAFANMELQSLNLYNPDDTVEGKLVPQKKRGILAVQATSLKCGGLVVSCTFDHRIADAYSANMFLVSWAKTAQPTEPRIIHTAPPCKPCFRCSLLSPRRPGSIHPSLNDMYVPMSMLSPRKELETTSEPDHLISRIYYVTVEELGHMQSLANSNPINGAKRTKLESFCAFLWKMVAASAMGKRVNVKMGIVVDGRKRLSNGDKDKEALMGSYFGNVLSIPFGGKLVEELLEKPLSWVAGEVHQFLETAVAEEHFLGLIDWVEAHRPVPGLAKIYSHGSEDGPAFVVSSGLRFPESEVDFGWGKPVFASYHFPWGGDAGYVMPMPSPAGNGDWVVYMHLLKVQVEMIESKAGHVFKPLTWDYLKY 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00907 476 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 9 470 - -
Bva12g00907 476 Pfam Transferase family 10 462 - -
Bva12g00907 476 Gene3D - 228 461 IPR023213 -
Bva12g00907 476 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 470 - -
Bva12g00907 476 Gene3D - 7 221 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00907 Bva-Chr12 9855051 9856640 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00907 33 459 Monolignol Biosynthesis Gene Families AT5G48930 25.571 5.78e-31 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00907 - - gmx:100785067 650.973