Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00905 ATGGGTAAGGGAGGAAAAGGAGAATTCACTGTGACTGTGAAAAAGGAAGAGGTGGTTGCTGCAGTTTTGCCACTGCAAGAACATTGGCTGCCACTCTCAAACCTCGACCTTCTTCTCCCTCCGTTGGACGTCGGAGTATTCTTCTGCTACAAGAATCTGGCTGCAACCCCCGCCACCGGAGGGGATGGCGATGGCTCAATGAACTTTGATGCCATGGTGGGGTCTCTGAAAAAGGCCTTGGCTCAGGCTCTTGTGACCTTCTATGCGTTTGCAGGTGAGGTGGTGCCAAATTCAGCCGGTGAACCTGAGCTGCTCTGCAATAACCGTGGGGTTGATTTTGTGGAAGCCTTTGCCGACAGCGAGCTGAAATCATTGAACTTGTATAACCCTGATGATACCATTGAAGGCAAGCTTGTTCCTCAGAAGAAGCATGGTGTTCTAGCTGTCCAGGCAACTTCTCTCAAGTGTGGTGGGTTGGTAGTTTCTTGTACATTTGACCATCGAATAGCCGATGCTTACTCAGCCAACATGTTTCTTGTCTCATGGGCCAAGATGGCTCAGCCCACCGAGACCACAATCATTCATACTGCTCCTCCATGTAAGCCATGTTTCCGGCGCTCTCTGCTTAGCCCTCGCCGCCCTGGTTCCTTCCACCCCTCTCTCGACGACATGTACGTCCCCGTGTCTATGCTTTCTCTTAGGAAGGAACCAGAAACAACATCGGAGCCCGACCATGTCATCAGCCGGATATACTATGTCGCGGCTAAAGAGCTCGACCACATGCAATCACTTGCAAACTCAAACACTATCAATGGGGCAAAGCGCACCAAGCTAGAGTCATTCTGTGCATTCTTGTGGAAGATGGTTGCTGCCAGTGCCGAGGGCAAAAGGGCTAGTGTCAAAATGGGAATTGTAGTTGATGGAAGGAAGAGATTAAGCAATGGAGACAAAGACAAAGAAGCACTTATGGGTTCTTATTTTGGAAACGTTCTTTCCATTCCCTTTGGTGGGAAACCAGTGGAAGAGCTTCTAGAAATGCCATTGAGTTGGGTGACCGATGAAGTTCATGAGTTCCTGGAAACCGCGGTGACGGAGGAGCATTTCTTAGGGCTTATTGATTGGGTGGAGGCTCACCGGCCGATGCCCGGTTTGGCCAAGATTTACTGTAATGGCAGTGAAGATGGACCTGCTTTTGTGGTTTCTTCCGGGCAGAGGTTCCCGGAATCTGAGGTGGATTTTGGGTGGGGGAAGCCGGATTTTGCTTCTTACCATTTCCCGTGGGGCAGTGACACTGGCTATGTGATGCCAATGCCAAGCCCCGCCGGGAATGGTGACTGGGTCGTTTACGTACACCTTCTAAAGGCGCAGGTGGAGATGATTGAGTTCAAGGCTGGTCACATCTTTAAACCTTTGACTTGGGATTATCTCAAATATTG 1436 0.5014 MGKGGKGEFTVTVKKEEVVAAVLPLQEHWLPLSNLDLLLPPLDVGVFFCYKNLAATPATGGDGDGSMNFDAMVGSLKKALAQALVTFYAFAGEVVPNSAGEPELLCNNRGVDFVEAFADSELKSLNLYNPDDTIEGKLVPQKKHGVLAVQATSLKCGGLVVSCTFDHRIADAYSANMFLVSWAKMAQPTETTIIHTAPPCKPCFRRSLLSPRRPGSFHPSLDDMYVPVSMLSLRKEPETTSEPDHVISRIYYVAAKELDHMQSLANSNTINGAKRTKLESFCAFLWKMVAASAEGKRASVKMGIVVDGRKRLSNGDKDKEALMGSYFGNVLSIPFGGKPVEELLEMPLSWVTDEVHEFLETAVTEEHFLGLIDWVEAHRPMPGLAKIYCNGSEDGPAFVVSSGQRFPESEVDFGWGKPDFASYHFPWGSDTGYVMPMPSPAGNGDWVVYVHLLKAQVEMIEFKAGHIFKPLTWDYLKY 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00905 478 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 9 472 - -
Bva12g00905 478 Gene3D - 6 222 IPR023213 -
Bva12g00905 478 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 472 - -
Bva12g00905 478 Pfam Transferase family 10 462 - -
Bva12g00905 478 Gene3D - 229 463 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00905 Bva-Chr12 9844792 9847146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00905 11 461 Monolignol Biosynthesis Gene Families AT5G48930 25.751 2.86e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00905 - - qsu:111987067 659.062