Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00887 ATGGAAGGAGTAGTCTCTGTCTTTCCAAGCAAAACTCTAAAACTCCACACAACAAGATCTTGGGACTTTATGGGTTTCCATGAAAAAGCCCAAGAAGCTAATTCAGCTGCAGAAAGTGATATTATAATTGGAGCTTTCGACACCGGAATCTGGCCAGAGTCCGAAAGTTTCAACGACAAAGGCTTTGGCCCTATTCCAAAAAAGTGGAAGGGAGAATGTGCAGGTGGAAAAAATTTCACTTGCAACAAGAAGATCATTGGAGCCCGTTATTATGGTGAAAATCTAACCATGAAATATCGTTCAGCAAGAGATGATAATGGCCATGGAAGCTATACTGCTTCAACAGCAGCTGGAAACAAAGTAAGAGATGTCAGCTTCTATGGAGTGGCAAGAGGTACAGCAAGAGGAGGAGCTCCATTTGCAAGGATTGCTGTTTACAAAGTTTGCAATCCAAATTGCAATGATGCAAATATCTTGGCAGCATATGATGATGCCATCGCAGATGGAGTGgatatcattaaaatttcagtGGGAGCCCTTCTACCATTAGATTTCATAGATGACAGCATTGCGATTGGTTCCTTCCATGCAATGGCAAAAGGGATTCTTACCATTAATTCTGCAGGTAACGAAGGTCCTGAGCGAGGATCAGTAACAAGCATTGCACCTTGGTTACTAAGTGTAACAGCCAGCACCATAGATCGCAGGTTTATTGACAAAGTCTCTCTTGGAGATGGAAGAACAATAGTTGGGCCATCAATAAATGGTTTCACATCAAATGGGAAAAAGTCTCCCTTGATTGATGGAGTGAAAGCTTCACTTCCCGGTTGTGACTATCCAGAATACTGCTATGCAAATTGTCTGGATgccaaaaagttaaaaggaaaaattcttttatgtgCTGATAAAAGTGGAATTTCAAAGAGTTTTTTCCATGGTGCCTCTGGATATATAGTACTAGGTGAGGATATTGTTATTAACATTGATCCTTTACCTTCATCATATGTTGGCCACAAAGTGTTCCATCTTCTTCAGTCATATGAAAATTCCACTAAGAATCCTCAAGCAGAGATACTAAAGAGTGAAACCATCAAAGATATTAATGCTCCTCTGGTTGCTTCTTTCACTTCTTGTGGACCCAATGAGAAGGTTCCAGAAATTATGAAGCCAGATATAAGTGCTCCAGGAGTAAATATCTTGGCTGCATATGCACCTATTTCTCCACCCTCTGGTCTTGGCGGAGATAAAAGATTACCCAATTACAACATAATATCTGGGACCTCGATATCATGTCCACATGTTGCTGGTGTAGCTGCATATGTCAAGAGTCTCCAGCAGCCATTAAATCTTCTATCATG 1358 0.3969 MEGVVSVFPSKTLKLHTTRSWDFMGFHEKAQEANSAAESDIIIGAFDTGIWPESESFNDKGFGPIPKKWKGECAGGKNFTCNKKIIGARYYGENLTMKYRSARDDNGHGSYTASTAAGNKVRDVSFYGVARGTARGGAPFARIAVYKVCNPNCNDANILAAYDDAIADGVDIIKISVGALLPLDFIDDSIAIGSFHAMAKGILTINSAGNEGPERGSVTSIAPWLLSVTASTIDRRFIDKVSLGDGRTIVGPSINGFTSNGKKSPLIDGVKASLPGCDYPEYCYANCLDAKKLKGKILLCADKSGISKSFFHGASGYIVLGEDIVINIDPLPSSYVGHKVFHLLQSYENSTKNPQAEILKSETIKDINAPLVASFTSCGPNEKVPEIMKPDISAPGVNILAAYAPISPPSGLGGDKRLPNYNIISGTSISCPHVAGVAAYVKSLQQPLNLLS 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00887 452 ProSiteProfiles Serine proteases, subtilase domain profile. 20 452 - -
Bva12g00887 452 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 2 444 - -
Bva12g00887 452 PRINTS Subtilisin serine protease family (S8) signature 104 117 IPR015500 -
Bva12g00887 452 PRINTS Subtilisin serine protease family (S8) signature 425 441 IPR015500 -
Bva12g00887 452 PRINTS Subtilisin serine protease family (S8) signature 38 57 IPR015500 -
Bva12g00887 452 CDD Peptidases_S8_3 13 445 IPR034197 -
Bva12g00887 452 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 444 IPR045051 -
Bva12g00887 452 ProSitePatterns Serine proteases, subtilase family, serine active site. 426 436 IPR023828 -
Bva12g00887 452 Pfam Subtilase family 39 445 IPR000209 GO:0006508|GO:0008236
Bva12g00887 452 Gene3D Peptidase S8/S53 domain 40 445 IPR036852 GO:0004252|GO:0006508
Bva12g00887 452 CDD PA_subtilisin_like 241 358 - -
Bva12g00887 452 Gene3D - 234 365 - -
Bva12g00887 452 SUPERFAMILY Subtilisin-like 15 444 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00887 Bva-Chr12 9757439 9758797 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00887 1 445 Subtilisin-like Serine Gene Family AT3G46850 56.071 3.98e-163 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00887 - - qsu:111998347 524.628