LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva12g00883	ATGTTGCAACTGGTTGTGGGTGATAATTTTGCACCAAGTTCCAGCTTGGTTCGAAGTTATACAAGGACTTTTAATGGGTTTGCTGCCAAACTCACTAGCCAAGAGAGTCAAAGGCTTGCTCAAATTGAAGGAGTAGTCTCTGTCTTTCCAAGCAGAACTCTGCAACTCCAAACAACTAGATCTTGGGATTTCATGGGTTTCCATGAAAAAACTCAAGAAACTGCTTCAGCCGAAAGTGACATAGTAATTGGGCATTTTGACACTGGAATCTGGCCAGAGTCAGAAAGTTTCAGTGACAAAGCAAGAGACTATGAAGGTCATGGAAGCCACACCGCTTCAACAGCAGCTGGAAACAAAGTAAGAGATGCCAGTTTCTATGGATTGGGAAGTGGTACAGCAAGAGGAGGGATCCCATCTGCAAGGATTGCTGTTTATAAAGTCTGCAATCAACATTGCACCGATGAAAATGTCTTGGCTGGATTTGATGAAGCAGATGGAGTGGACATCATTACAATTTCAATAACACCCCCTTATCCACAAGATTTCATAGGAGACAGTATTGCAATTGGTTCTTTTCATGCAATGGCAAAAGGGATTTTTACTGTTCAAGCTGCAGGTAACAATGGTCCTGAGCGAAAATCATTGGGAAGCATTGCACCTTGGTTAATGAGCGTAGCAGCCAGCACAATAGATCGCAGATTCattgacaaaatctctcttggaGATGGAAGTACAATAGTTGGGCAATCAATAAATGGTTTCTCATCACATGGGAAAAAATCTCCCTTGATTGATTGTGTGAAAGCTTCATATCCTAAGTGTAAATATGCCGAAAATTGTTTTGGAGAATGCTTGAATCCCAAGATTGTAAATGGAaaaattcttctatttcctGGTGCTGGGGCTAGAGATCTGGCTTTTAGCAACAATGCATCTGGGTTTATAGCATCGGATGAGGAAAAtaggtttagccattttaTTGATCCTTTACCTTCATCATACGTAGGTTTTAAAGACTTTCAACTTCTTCAATCATATGAAAATTCCACCAAGAATCCTGAAGCCGAGATACTGAAGAGTGAAACTATTACAGATGCTAATGCTCCTTTggttgcttctttttcttctcatggACCCAATCAAAGGGTTCCGGAAATCATGAAGCCTGATATAAGTGCACCAGGAGTAGATATATTGGCTGCATATCCGCCTAGGTACCCTGATGCTAAAAGATTGTACAGCATATTGTCTGGAACTTCTATGTCATGCCCACATGTTGCTGGTGTAGCTGCATATATCAAGAGTTTTCACCCTGATTGGTCTCCGGCCGCCATTAAATCTTCTATCATGACCACAGCAAAGCCAATGAATGTCAGTGGAGATAAAGAATTTGCTTATGGGTCAGGTCACCTGAACCCAGTTGAAGCTGTGAATCCTGGTCTGGTTTATGAACTTTCTGGTTTATG	1466	0.395	MLQLVVGDNFAPSSSLVRSYTRTFNGFAAKLTSQESQRLAQIEGVVSVFPSRTLQLQTTRSWDFMGFHEKTQETASAESDIVIGHFDTGIWPESESFSDKARDYEGHGSHTASTAAGNKVRDASFYGLGSGTARGGIPSARIAVYKVCNQHCTDENVLAGFDEADGVDIITISITPPYPQDFIGDSIAIGSFHAMAKGIFTVQAAGNNGPERKSLGSIAPWLMSVAASTIDRRFIDKISLGDGSTIVGQSINGFSSHGKKSPLIDCVKASYPKCKYAENCFGECLNPKIVNGKILLFPGAGARDLAFSNNASGFIASDEENRFSHFIDPLPSSYVGFKDFQLLQSYENSTKNPEAEILKSETITDANAPLVASFSSHGPNQRVPEIMKPDISAPGVDILAAYPPRYPDAKRLYSILSGTSMSCPHVAGVAAYIKSFHPDWSPAAIKSSIMTTAKPMNVSGDKEFAYGSGHLNPVEAVNPGLVYELSGL	488

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva12g00883	488	PANTHER	SUBTILISIN-LIKE PROTEASE SBT4.3	9	100	-	-
	Bva12g00883	488	Pfam	Peptidase inhibitor I9	13	56	IPR010259	-
	Bva12g00883	488	Pfam	Subtilase family	87	468	IPR000209	GO:0006508\|GO:0008236
	Bva12g00883	488	Gene3D	-	231	364	-	-
	Bva12g00883	488	SUPERFAMILY	Subtilisin-like	56	481	IPR036852	GO:0004252\|GO:0006508
	Bva12g00883	488	CDD	PA_subtilisin_like	238	357	-	-
	Bva12g00883	488	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	101	484	IPR045051	-
	Bva12g00883	488	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	9	100	IPR045051	-
	Bva12g00883	488	ProSiteProfiles	Serine proteases, subtilase domain profile.	61	477	-	-
	Bva12g00883	488	PRINTS	Subtilisin serine protease family (S8) signature	78	97	IPR015500	-
	Bva12g00883	488	PRINTS	Subtilisin serine protease family (S8) signature	103	116	IPR015500	-
	Bva12g00883	488	PRINTS	Subtilisin serine protease family (S8) signature	417	433	IPR015500	-
	Bva12g00883	488	PANTHER	SUBTILISIN-LIKE PROTEASE SBT4.3	101	484	-	-
	Bva12g00883	488	Gene3D	Peptidase S8/S53 domain	100	485	IPR036852	GO:0004252\|GO:0006508
	Bva12g00883	488	ProSitePatterns	Serine proteases, subtilase family, serine active site.	418	428	IPR023828	-
	Bva12g00883	488	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	1	57	IPR037045	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva12g00883	Bva-Chr12	9748340	9749949	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva12g00883	1	485	Subtilisin-like Serine Gene Family	AT5G59190	48.976	1.99e-172	500

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva12g00883	-		-	cit:102607911	534.258