Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00882 ATGGACAATACTTGGGGTTGGGGTTCTATTATATTGTCcattactttctttcttgccATTGGCAACAAGCACTCATTTTGTGATGCCGATGCCATTGTGAATGGTGATGACAGAAAAGTTTACATCATATACATGGGATCTCTTCCAAAGGAAAACTACTCTCCATCATCGCACCACCTAAGCATGTTGCATGAGGTTGTAGGTGACCATTTTGAAGCAAGCTTGGTTCGAAGCTATACAAGGAGTTTCAATGGGTTTGCTGCCAGACTTACCAGCCAGGAGACTCAAAAGCTTGCTCAAATGGAAGGAGTAGTCTCTATTTTTCCAAGCAAAACTCTACAACTCCAAACAACAAGATCTTGGGATTTCATGGGTTTCCATGAAAAATCCCAAGGAACTACTTCAGCTGAAAGTGCCGTTATAATTGGACATTTTGACACTGGAATTTGGCCAGAGTCAAAAAGTTTTAGCGACGAAGGCTTTGGCCCTATTCCAAAAAAGTGGAAGGGGAAATGTGCAGGGGGCTACAACTTTACTTGCAACAAGAAGATCATTGGAGCTCGTTTCTATGGCCATAATCCATCCATAAATGACTCAGCAAGAGACTTTGATGGTCATGGAAGCCACACTGCCTCAACAGCAGCTGGAAACAAAGTAAGAGACGCGAGTTTCTTTGGAGTTGCTAGAGGTACAGCAAGAGGAGGGGTCTCATCTGCAAGGATTGCTGTTTATAAAGTTTGCAATCCAAGTTGCACCGATGAAAATCTCTTGGCTGCATATGATGATGCCATTGCTGATGGAGTGGACATCATTACATTGTCACTAGGACCCGTTTCCCCACCAGATTTCATAGATGACAGTGTTGCTATTGGTTCTTTCCATGCAATGGCAAAAGGGATTCTTACTGTTAATTCTGCAGGTAACGAAGGTCCTGATAGAGAATCAGTAGAAAGCATTGCACCTTGGTTACTAAGCGTAGCAGCAAGCACCATAGATCGCGGATTCATTGACAAAGTCTCTCTTGGAGACGGAAGAACAATAGTTGGGCAATCAATAAATGGTTTCACATCACATGGTAAAAAATTTCCCTTGATTGATGGTGTGAGAGCTTCATATCCTAAATGTAAATTTGCCAAAAATTGTTGGATAGAATGCTTGGATCCCAAGattgtgaaaggaaaaattctcTTATGTGCTTCCGATGTTATGATTAGTAAGGCTTTAAACTATGGTGCATCTGGGTTTATAGTATTGGATGAGACTAATTTGACTTACCATAAGATTGATCCTTTTCCTTTATCATACGTGGGTCTTGAAGAGTTTCAACTTCTTCAATCGTATGTAAATTCCACAAAGAATCCTCAAGCTGAGATACTAACAAGTGAAACAGTTAAAGATGCTAATGCTCCTTTGGTTGCTCCTTTCTCTTCTCGTGGACCCAATCAAAGGGTTCCGGAAATCATGAAGCCAGATATAAGTGCCCCAGGAGTAGATATATTGGCTGCATTTTCACCTATTCCTCCACCCTCTGGCTGGACAGAAGATAAAAGATCTGCCAATTACAGCCTACTTACTGGGACATCGATGTCATGCCCACATGTTGCTGGCGTAGCTGCATATATCAAGAGTTTTCACCCTGATTGGTCTCCGGCAGCCATTAAATCTTCAATCATGACAACAGCAAAGCCAATGAATGGCAGTGAAGATAAAGAATTTGCTTATGGGTCAGGTCACTTGAACCCAATTGAAGCTGTGAATCCTGGTCTGGTTTATGATCTTTCAAGGGATGACTATGTGGAGATGCTTTGCAATATTGGGTATACCACATTAAAACTTAGAAAAATCACTGGAGACAATAGTACTTGCGGAGGATCTCCTCATAGATCGTCGGTAAGAGACTTAAATTATCCTGCAATTGCAATGAGAGTTCATCCACTGCAACCTTTCAAGATCAGTTTTAGAAGAACAGTCACAAATGTTGGCTCAGCTAACTCCACATATAAGGCAAATATTCTAGAAGGctcaaaaattaacattacAGTAGTGCCTAATGTTCTTtcgtttaaatttttgaaagagaaacaatCTTTTGTTGTGACTATTATTGGAGAAAAGATTCATGTTGAGAGCATAGTCTCCTCATCACTAATATGGACCGATGGAATTCATTGTGTGAGAAGTCCTATTATTCTAGCTTGTAGGTG 2204 0.3966 MDNTWGWGSIILSITFFLAIGNKHSFCDADAIVNGDDRKVYIIYMGSLPKENYSPSSHHLSMLHEVVGDHFEASLVRSYTRSFNGFAARLTSQETQKLAQMEGVVSIFPSKTLQLQTTRSWDFMGFHEKSQGTTSAESAVIIGHFDTGIWPESKSFSDEGFGPIPKKWKGKCAGGYNFTCNKKIIGARFYGHNPSINDSARDFDGHGSHTASTAAGNKVRDASFFGVARGTARGGVSSARIAVYKVCNPSCTDENLLAAYDDAIADGVDIITLSLGPVSPPDFIDDSVAIGSFHAMAKGILTVNSAGNEGPDRESVESIAPWLLSVAASTIDRGFIDKVSLGDGRTIVGQSINGFTSHGKKFPLIDGVRASYPKCKFAKNCWIECLDPKIVKGKILLCASDVMISKALNYGASGFIVLDETNLTYHKIDPFPLSYVGLEEFQLLQSYVNSTKNPQAEILTSETVKDANAPLVAPFSSRGPNQRVPEIMKPDISAPGVDILAAFSPIPPPSGWTEDKRSANYSLLTGTSMSCPHVAGVAAYIKSFHPDWSPAAIKSSIMTTAKPMNGSEDKEFAYGSGHLNPIEAVNPGLVYDLSRDDYVEMLCNIGYTTLKLRKITGDNSTCGGSPHRSSVRDLNYPAIAMRVHPLQPFKISFRRTVTNVGSANSTYKANILEGSKINITVVPNVLSFKFLKEKQSFVVTIIGEKIHVESIVSSSLIWTDGIHCVRSPIILACR 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00882 734 Pfam Peptidase inhibitor I9 40 115 IPR010259 -
Bva12g00882 734 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Bva12g00882 734 PRINTS Subtilisin serine protease family (S8) signature 525 541 IPR015500 -
Bva12g00882 734 PRINTS Subtilisin serine protease family (S8) signature 202 215 IPR015500 -
Bva12g00882 734 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 39 732 IPR045051 -
Bva12g00882 734 Gene3D - 602 733 - -
Bva12g00882 734 CDD Peptidases_S8_3 113 561 IPR034197 -
Bva12g00882 734 ProSitePatterns Serine proteases, subtilase family, serine active site. 526 536 IPR023828 -
Bva12g00882 734 Gene3D Peptidase S8/S53 domain 140 598 IPR036852 GO:0004252|GO:0006508
Bva12g00882 734 Pfam Fibronectin type-III domain 633 730 IPR041469 -
Bva12g00882 734 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 28 116 IPR037045 -
Bva12g00882 734 ProSiteProfiles Serine proteases, subtilase domain profile. 120 585 - -
Bva12g00882 734 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 39 732 - -
Bva12g00882 734 SUPERFAMILY Subtilisin-like 115 589 IPR036852 GO:0004252|GO:0006508
Bva12g00882 734 Pfam Subtilase family 138 577 IPR000209 GO:0006508|GO:0008236
Bva12g00882 734 CDD PA_subtilisin_like 339 458 - -
Bva12g00882 734 Gene3D - 332 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00882 Bva-Chr12 9744453 9746657 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00882 37 731 Subtilisin-like Serine Gene Family AT5G59100 54.161 0.0 766
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00882 - - qsu:111998347 805.438