LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva12g00863	ATGGTGGATCTTGCCATCTCCATTGCAGCTAAGACTGCAGAATATATGGTTGGACCAACTATACGTGAAGCACGATATTGCTTCCGCTTCAACACCTTTGCTGAAGATCTTGCAGATGCAAAGAAAGAGTTGGAGTCAAAATGGAAGATTGTGAAGCAACGTGAGAAAGAAGCCACTGAAAGAACCGAAAAGATTGAGAAGAGTGTTGAGGAGTGGCTTCAAGATGTGGAATATGTGCTAGAAGAGGTGAGGATTCTTCAAGAGAAAATGCAAGCAAGCAGATGCAGATGGAGATGCAGAAGCTGGTTTTGTGGGCAGTGCTGCCGGCGTAACCTAGCCAAACAAATGGCTAAGAAGACCAAGAAAATGAATTGGctcagcaacaacaacaaatttgAGCCATTTTCTCGGCCCTCTGGTCTTCGAGGCATCAAATACTACACTTCTAAAGATTATGTGTATTTCAAATCCACAACGTCAGCTTACAATAAGCTTTTGGCTGCACTAAAGGATAACAAGGATGATATAATTGGTCTATATGGGATGGGGGGGTCAGGCAAAACTGCATTGGTGAAAGAGGTGGGAAAGAAAGCTCAAGAGCTAGAGTTCTTTGAGAGGGCTGTCATTGCAGTTGTTTCTCACACTCCAAATGTCAGAAACATCCAAGATCAACTCATAGATGCCTTGGGTTTGAGGTTAGAGGAACAATCAAACACTTACAGAGCTCAAAGACTATCCGATAGATTGAGGGATGGCAGAACTCTTGTAATCTTGGATGATGTGTGGGAAAAACTTGACTTTGAACAAATTGGGATTCCAATCAATGACAACAACAAGGCCTGCAGAGTGCTTCTAACCACACGAAGCCATGAAGTTTGTAGTTCCATGCAATGCCAGAAAATAGTCCAACTCTCTCTCTTGACCAAAGAGGAGTCTTGGGATTTCTTCAAAAGGTGTTCAAGAATAACTGAAGAGTCTGATAGTGCAGTAACAGCAAAGAAAGTTGCTGATAAATGTCAAGGATTACCTATTGCAATCACAACAGTAGGAAACACGTTGAGGGGAAAGAGTCTTGATGAGTGGAAGAATGCACTGACGAGGCTGGAACGCTCCCACCATTTAGATGTTGCAAAGGGGATGCGGAATCCTTATGAATGTATCAAGTTAAGCTATGATAATTTGACATGCCCATTGGCAAAGTCCATTTTCTTGTTGTGCTCCATCTTTCCAGAGGATTCAGAAATTGAGGTGGAAGATTTGGTTCGGTTTGGGAAGGGCCTCTTGCCAACGACTATTGGCCGCTCAATGGAAGAAGCAAGGAGGGAGATAAATGAAGCAGTTAACATCCTATTAAACTTTTGTTTGCTGCTCTATACTGAAAGCAAAGAAAGGGTGAAAGTTCATGATTTGGTCCGTGATGTAGCATTGTGGATTGCAACCAAAGAAGGTCAAGAAGTCATGGTATGCGCAAGTGCGAATCCTCATATCTTGGAAGAGGATGAGACTATTCAAGGCATGGCCAGAATATCCCTATGGGACTTGAAGAATCCTCTGCCTCAGGGCGAGGACAAATCGATCAAGCTCCCTGACCAATTGATTGAGTGTCCACAACTTGATACTCTATTACTTCATTCTGAAGGTGCTGGCTTTGAGAtaccattttcatcttttgaaAGGATTGGAGCTCTAAAAATCTTAGCCTTCATAAAATTCAGGTATAGGTGGAATATGTCTATGTTGAGGTGGCAATCCAAGTTCACTCTGTCAATGCTAGAGTCGATTAAGTTCTTGACAGGTCTTCGAACTCTATGCTTGAGGGGATATAAATTAGGTGACATCTCTGTGCTGGAAAGCCTTAGTCTATTGGAGATTCTTGATTTGCGTGGTTCTTCTTTCGCTGAGCTGCCAAATGGGATTGCAGcattgaagaaattgaagctTCTGGATTTGTTTATGTGTtcaattattaagaataatcCATATGAAGTAGTCGGGAGATGCTCAACACTAGaagaactatatatatggACAGACAGAGATAATTCTGTAGAAAATATCTCTTTCCCAAAACTGAACAGGTATGCTATAGTACGTGCCAAGACTAAAATTAACTACTTTGAATCTGacttatataactttttggCAACGCATGGCCCATCTAGAGCTCTATGCCTTGAAAACTTTGATTCCTCTCCACGGAGCTTTGAATCATCATCATTGACCAAGAATCTCTTTCAAAGAGCAGAAGGTCTGTATTTACAACATCTTCAGGGAGGCTGCAAGAACATAATCCCAAACATGGATCGGCGAGGCATGAATCAGTTGATTGGCCTTGTACTTGATTCTTGTTTGGAGATAGAATGCCTCTTTGATATTGCTAGCAATTTGTTTAAAGGAAGACCTGCGTTCTCAAAGCTTGTTTTCTTGAGACTGATTAAAATGGAGGGTCTTATACAAGTTTTTTGTGGTGGAGCTTCTGGCTGCACTCTGGAAAAATTGGAAGAGCTAAGAATAGAAGATTGTGGACGACTTCGAAGCATGTCCTTTCCAAGGGGCCCAAATCTGTGCAAGCTCAGAATGGTAAGATTGCACGAATGCCAGAAGCTGAGATCAGTCTTCACACAATCCATTTGTCAAACTCTAGTGATGCTTGAGGAACTAAGCATACGGCAATGTACAGAAATGGAACATGTAATAGCCGATGATGAGCTGCAAGAAAGGATAGCAGGTGGTGCTAGCACTCAAACTCATAGCTCGAGAGTGTTCCCACATTTACGAATCCTTGATGTCCAAGGCTGTGAAAGGTTAGAATCAATCATTCCAGTTACTTTTGCTCAAGGTTTGTTAAGATTGGAGGAAATAAATATGAGGAAGAATCCTGAGTTGAATTATGTATTCGGCCCACACAATTCCATGGATGAGATTGTGATTGTGACTGAGATTAAGCTACTTGCTCTGAGAAAACTCCGACTCAAATCATTACCAAAGCTGATCAGTATTTGCCCAGAAGATACTCAACCAAGGTCACCAATTCCAAAAGAGTTTGAATGCATTGAATGTCCCAGTTTGCATCCCAATATTCTTATGAGTATGATGCAGCAAGAACCCCCAACTACAACGGAGGAGGCTGTTGGTGCACATGAAACTCCCGATAAAGGTAATGAATTGGTGGAAGAAGGTGGACAGCCAGCAGAGCCTCCAAAACCAAGCTTACTAACACGCTTGTGTGGCAAAAGATTTAAGCATGAGCAGCATGCAAAAGCTCACATAGTGAATGAATACAAGAAAGATACTAGTTCAACCACCAATTTGAACTA	3317	0.4079	MVDLAISIAAKTAEYMVGPTIREARYCFRFNTFAEDLADAKKELESKWKIVKQREKEATERTEKIEKSVEEWLQDVEYVLEEVRILQEKMQASRCRWRCRSWFCGQCCRRNLAKQMAKKTKKMNWLSNNNKFEPFSRPSGLRGIKYYTSKDYVYFKSTTSAYNKLLAALKDNKDDIIGLYGMGGSGKTALVKEVGKKAQELEFFERAVIAVVSHTPNVRNIQDQLIDALGLRLEEQSNTYRAQRLSDRLRDGRTLVILDDVWEKLDFEQIGIPINDNNKACRVLLTTRSHEVCSSMQCQKIVQLSLLTKEESWDFFKRCSRITEESDSAVTAKKVADKCQGLPIAITTVGNTLRGKSLDEWKNALTRLERSHHLDVAKGMRNPYECIKLSYDNLTCPLAKSIFLLCSIFPEDSEIEVEDLVRFGKGLLPTTIGRSMEEARREINEAVNILLNFCLLLYTESKERVKVHDLVRDVALWIATKEGQEVMVCASANPHILEEDETIQGMARISLWDLKNPLPQGEDKSIKLPDQLIECPQLDTLLLHSEGAGFEIPFSSFERIGALKILAFIKFRYRWNMSMLRWQSKFTLSMLESIKFLTGLRTLCLRGYKLGDISVLESLSLLEILDLRGSSFAELPNGIAALKKLKLLDLFMCSIIKNNPYEVVGRCSTLEELYIWTDRDNSVENISFPKLNRYAIVRAKTKINYFESDLYNFLATHGPSRALCLENFDSSPRSFESSSLTKNLFQRAEGLYLQHLQGGCKNIIPNMDRRGMNQLIGLVLDSCLEIECLFDIASNLFKGRPAFSKLVFLRLIKMEGLIQVFCGGASGCTLEKLEELRIEDCGRLRSMSFPRGPNLCKLRMVRLHECQKLRSVFTQSICQTLVMLEELSIRQCTEMEHVIADDELQERIAGGASTQTHSSRVFPHLRILDVQGCERLESIIPVTFAQGLLRLEEINMRKNPELNYVFGPHNSMDEIVIVTEIKLLALRKLRLKSLPKLISICPEDTQPRSPIPKEFECIECPSLHPNILMSMMQQEPPTTTEEAVGAHETPDKGNELVEEGGQPAEPPKPSLLTRLCGKRFKHEQHAKAHIVNEYKKDTSSTTNLN	1105

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva12g00863	1105	CDD	AAA	161	287	-	-
	Bva12g00863	1105	MobiDBLite	consensus disorder prediction	1034	1072	-	-
	Bva12g00863	1105	PANTHER	DISEASE RESISTANCE RPS5-LIKE PROTEIN	7	942	-	-
	Bva12g00863	1105	PRINTS	Disease resistance protein signature	640	656	-	-
	Bva12g00863	1105	PRINTS	Disease resistance protein signature	176	191	-	-
	Bva12g00863	1105	PRINTS	Disease resistance protein signature	248	262	-	-
	Bva12g00863	1105	PRINTS	Disease resistance protein signature	339	353	-	-
	Bva12g00863	1105	Gene3D	-	306	389	IPR042197	-
	Bva12g00863	1105	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	142	406	IPR027417	-
	Bva12g00863	1105	Gene3D	Ribonuclease Inhibitor	751	1007	IPR032675	-
	Bva12g00863	1105	SUPERFAMILY	L domain-like	466	989	-	-
	Bva12g00863	1105	Gene3D	-	390	476	IPR036388	-
	Bva12g00863	1105	Gene3D	-	147	304	IPR027417	-
	Bva12g00863	1105	Gene3D	Ribonuclease Inhibitor	477	701	IPR032675	-
	Bva12g00863	1105	PANTHER	-	7	942	-	-
	Bva12g00863	1105	Pfam	NB-ARC domain	164	393	IPR002182	GO:0043531

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva12g00863	Bva-Chr12	9597969	9601528	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva12g00863	177	486	WRKY Transcription Factor Family	AT5G45050	24.534	1.01e-10	64.3

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva12g00863	-		-	gmx:102662074	917.531