LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva12g00860	ATGTTTGGTAGCAAGGCTTTTGAGAATTGGGCTAATGTTAGAGAGACTGAGGTGGGTTATATGCTCATGGCCATGTATGAGGCTAGCAAACGAGGTGAGACAGTGGAGATTGGAGATCTTTTGAGCTGTGCAATCACAAACATGGTGAGCCAAGTGATGCTGAGTTGTCGCATATTTGCAAACAAAGGGTTGGAGTCTAAGGAGTTTAAGGATATGGTGGTGGAGTTCATGGTGATTTCTGGGGTTAATATTGGGGATTTTATACCTTGTATTGCTTGGATGGACTTGCAGGGGGTGGTGGGTAAAATGAAGAGGCTGCATAAAAGGTTTGATGTGTTGTTGAATAAGATGATGGAGGAGCATCTCAAGTCTGCAAGTGAGAGAAAGGGGAAGCCAGattttttggatattttgaTGGATATTAATAGGGATGATCCTTCTGGTGAAAAACTCAGTATAACCAACATTAAGGGACTCTTACTGAATTTATTCACTGCAGGCACAGACACGTCATCAAGCATCATGGAGTGGGCATTAGCAGAAATGTTGAAAAACCCAACCATCCTAAAGAGGGCACAGCAAGAGATAGACCAAGTGAAGGCAGAGCCTTTGTCTGCAGTGATTAGCCCTAGGTTGGAACCAGATgtttatgtttg	656	0.4207	MFGSKAFENWANVRETEVGYMLMAMYEASKRGETVEIGDLLSCAITNMVSQVMLSCRIFANKGLESKEFKDMVVEFMVISGVNIGDFIPCIAWMDLQGVVGKMKRLHKRFDVLLNKMMEEHLKSASERKGKPDFLDILMDINRDDPSGEKLSITNIKGLLLNLFTAGTDTSSSIMEWALAEMLKNPTILKRAQQEIDQVKAEPLSAVISPRLEPDVYV	218

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva12g00860	218	PRINTS	E-class P450 group I signature	175	201	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Bva12g00860	218	PRINTS	E-class P450 group I signature	155	172	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Bva12g00860	218	PRINTS	E-class P450 group I signature	44	62	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Bva12g00860	218	Gene3D	Cytochrome P450	1	211	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Bva12g00860	218	PANTHER	CYTOCHROME P450 71B11-RELATED	1	199	-	-
	Bva12g00860	218	SUPERFAMILY	Cytochrome P450	2	201	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Bva12g00860	218	PANTHER	FLAVONOID 3'-MONOOXYGENASE	1	199	-	-
	Bva12g00860	218	Pfam	Cytochrome P450	9	199	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva12g00860	Bva-Chr12	9581799	9584555	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva12g00860	1	199	Cytochrome P450	AT5G07990	41.872	3.96e-49	166

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva12g00860	K13083		-	egr:104433887	267.7

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bva12g00860	12	9581799	9584555	Bva12g00860	12	9581799	9584555	ECH