Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00850 ATGGCCATAATCTGGTGGAGATGGAGATTGGGGTCTGTTTGGCTTATTCTAATATCGCTTCTGTTTTGCAGTGCTTCTTCACGTTCCATTGTCAACAATCTGCCTGGTTTCGGGGATCTCCCATTCAAGTTGGAAACAGGATACATTGGAGTGGGAGACAGAGAAGAATTGcaactattttattattttgttgaatctGAAAGGAATTCCATGACAGATCCACTCTTAATTTGGTTAGTTGGAGGTCCAGGTTGCTCTGCTCTTTCCGCTTTCTTCTATGAAAATgGACCGTTCTTGTTCAACTATGCCAATTTCACTGGGACTCTTCCAAAACTTGAATTGAACCCAAATACTTGGTCAAAGATTCTTAACGTGATATATGTTGACGTACCAGTTGGTGCTGGATTTTCTTACTCAACAACCCCACAAGGCTATTACACTGATGACCAAAGATCCATAGAGAACCTCTATGAGTTTCTACAAAAGTGGCTTATGGATCACCCTGAATTTGAGTCAAATCCACTCTACATTGGCGGCGGTTCATATTCAGGGATATTTGCTGCTCCCTTTGTTCAAAAAGTATATCAAGgtTCTAAAGCAGGAGTCACGCCACTCATGAACATCCAAGGTTACGTGCTTGCAAGCCCAatgattgatatatttttgaataccAATTCAAAAGTTCTATTTGCTCATCAGCTATCACTTATATCAGACAAACTCTATGagTCAATTAAAGCTAGCTGCAATGGTGATTATGTGAACATTGATCCCGACAATATAAAATGTGTATCAGATTATGAAGCTTACTCTGAGTTAGTTAGTGACCTATGTCTACCTAATATTCATGAACCAGCTTGTCTCTCTGGGCATCATGAGAATCAAAGAATTCTCTTTGAAGACTCTCACATAACTTCACAGTCCAAGTTTTGGTGTCGGgATAATTATTTCGTTTTTAGCGAGGTGTGGGCAAATGATGATAGTGTTCGAAAGGCTCTCAATGTTAGAGAGggaacTAAACAGCAATTCCTAAGATGCAATAAGACTGATTTGAAATACACCAAGAATATCCAGAGTGTTATTCAGTATCATCACAATCTCACCAACACAAATCTTCGATCTCTCATTTACTGTGGTGATGTTGACTTCATGACACCACATATTGGTGCACAATCTTTCATTCAGTCACTTAATTTGACAGTGAAGAATACTTGGAATGCCTGGATTGTTGATGGTCAAGTAGCAGGATATACTGAAGCGTACGAAAATAAAGAGTTTCATCTTACTTATGCAACTGTCAAGGCAACGGGCCATGTAGCACAAATGTACAAGCCTAAAGAGTTGCCAAAGTTTGTTGGCTTGCTTTCTGTGAATCATCTACGAGCAGAAGCAGTGAAGAATGAGGATAATGATGTGGTGGAAATGGTGGTGTGTTTTGGCTATTCTATTGCTTGTGTTTTCCAGTGCGTCTTCACATTCCATCGTCAACAATCTACCAGATACATTGGAGTAGGAGACAAAGAAGAGGTGcaactattttattattttcttgaatctCAAAGGGATCCCGTTAGAGATCCACTCTTGCTTTGGCTAATTGGAGGTCCAGGTTGCTCTGCTCTTTCCGGtttcttttatgaaaatgGACCTTTTGTGTTCAACTATGCCAATTTCTCTGGGAGCCTTCCGAAACTTGAATTGAATCCAAATACTTGGACAAAGGTTGTCAGCATAATATATGTTGACGCACCAGTTGGCACTGGATTTTCTTACTCAACAACCCAACAAGGCTATCATACCAATGACCAAAAGTCAATAGAGAACCTCTATGAATTTATACGAAAGTGGCTTATGAATCACCCTGAATTTGAGTCAAATCCACTTTACATTGGCGGTGGTTCATATTCAGGGCTATATGTTCCTCCATTGGTCCAAAAAGCATATGAAGGTTCTAAAGCAGGACTCGTGCCACTGATGAACATCCAAGGTTATGTGCTTGCAAGTCCAGCAACGGATaagtttttgaataataattcaaaagttGAATTTGCCCACCGACTATCACTTATACCAGACAAGCTCTACGAGTCTATCAAAGCTAGCTGCAATGATGATTATATGAACATCAATCCCAACAATGAAAAATGTGTATCAGATCATGAAACTTATTCTGAGTTAGTCCGTGACATAaatgaatatgatatttatgagCCAGTTTCTCTTTTAGGGCGTCatgaaaatcaaagaattCTGTTTGAAGACTCTCAGTCTCACATCACTGCACAGTCGAAGTTCTGGTCTAGAGATTATCTGTATGTTTTTAGCGAGGTGTGGGCAAATGATGATAGTGTTCGAATGGCTCTCAATGTTAGAGAGggaacTAAACAGCAATTCCTGAGATGCAATTGGACTGATTTGAAATACACCAAGAATATCCAGAGTGTTATTCAGTATCATCACAATCTCACCAACACAAATCTTCGATCTCTCATTTATTGTGGTGATGTTGACTTCTCGATACCACATATTGGTACACAATCTTGGATTCAGTCACTTAATTTGACAGTGAAAAATCCTTGGAATGCCTGGTTCGTTGATGCTCAAGTATCAGGTGCTTCTTCACGTTCCATTGTCAACAATCTTCCAGGTTTTGGTGATCTCCCATTCAAGTTGGAAACTGGATACATTGGAGTGGGCGACAAAGAAGAGATtcagatattttattattttgttgaatctCAAAGGAATCCCGTGGCAGATCCACTCTTAGTTTGGCTAGTTGGAGGTCCAGGTTGCTCTGGTCTTTCGGCCTTCTTTTATGAAAATGGACCGTTGTTGTTCAACTATGCCAATATCACTGGGACTCTTCCAAAACTTGAATTGAACCAAAATACTTGGACAAAGATTCTTAACGTGATATATGTTGACGTACCAGTTGGTGCTGGATTTTCTTACTCAACAACCCCACAAGGCTATTACACTGACGACCAAAGGTCCATAGAGAACCTCTATGAGTTTCTACAAAAGTGGCTTATGGATCACCCTGAATTTGAGTCAAATCCACTCTACATTGGCGGCGGTTCATATTCAGGGATATTTGTTGCTCCCTTTGTTCAAAAAGTATATCAAGgttcTAAAGCAGGAGTCATGGCACTCATGAACATCCAAGGTTATGTGCTTGCAAGTCCAATGACcgatatatttttgaatatcaaTTCAAAAGTTCAATTTGCTCACCAATTATCACTTATACCAGACAAGCTCTATGAGTCAATTAAAGCTAGTTGCAATGGTGATTATGTGAACATTGATCCCGACAATATAAAATGTGTATCAGATTATGAAGCTTACTCTGAGCTAGTCCGTGgcataaatgaagaaaatatttatgaaccAGCTTGTCTTTCTGGGCATCATCAGAATCAAAGAATTCTCTTTGAAGACTCTCACATAACTGCACAGTCCAAGTTTTGGTGTCGGgTTAGATTTTATGTTCTTAGCGAGGTGTGGGCAAATGATGATAGTGTTCGAAAGGCTCTCAATGTTAGAGAGggaacTAAACAGCAATTCCTGAGATGCAATAGGACTGATTTGAAATACACCCAGAATATCCAGAGTGTTATTCAGTATCATCACAATCTCACCAACACAAATCTTCGATCTCTCATTTATTGTGGTGATGTTGACTTCTCGATACCACATACTGGTACACAATCTTGGATTCAGTCACTTAATTTGACAGTGAAGAATCCTTGGAATGCCTGGTTCGTTGATGCTCAAGTAGCAGGATACGCAGAAGCATACGAGAATAAGGAGTTTCATCTTACTTATGCTACTGTCAAGGGAGCGGGTCATGTAGCGCAGCATTACAAGCCTAAAGAAGTTTACGAAATGATAGACAGATGGTTCTCATATTATCCTCTCTA 3926 0.3785 MAIIWWRWRLGSVWLILISLLFCSASSRSIVNNLPGFGDLPFKLETGYIGVGDREELQLFYYFVESERNSMTDPLLIWLVGGPGCSALSAFFYENGPFLFNYANFTGTLPKLELNPNTWSKILNVIYVDVPVGAGFSYSTTPQGYYTDDQRSIENLYEFLQKWLMDHPEFESNPLYIGGGSYSGIFAAPFVQKVYQGSKAGVTPLMNIQGYVLASPMIDIFLNTNSKVLFAHQLSLISDKLYESIKASCNGDYVNIDPDNIKCVSDYEAYSELVSDLCLPNIHEPACLSGHHENQRILFEDSHITSQSKFWCRDNYFVFSEVWANDDSVRKALNVREGTKQQFLRCNKTDLKYTKNIQSVIQYHHNLTNTNLRSLIYCGDVDFMTPHIGAQSFIQSLNLTVKNTWNAWIVDGQVAGYTEAYENKEFHLTYATVKATGHVAQMYKPKELPKFVGLLSVNHLRAEAVKNEDNDVVEMVVCFGYSIACVFQCVFTFHRQQSTRYIGVGDKEEVQLFYYFLESQRDPVRDPLLLWLIGGPGCSALSGFFYENGPFVFNYANFSGSLPKLELNPNTWTKVVSIIYVDAPVGTGFSYSTTQQGYHTNDQKSIENLYEFIRKWLMNHPEFESNPLYIGGGSYSGLYVPPLVQKAYEGSKAGLVPLMNIQGYVLASPATDKFLNNNSKVEFAHRLSLIPDKLYESIKASCNDDYMNINPNNEKCVSDHETYSELVRDINEYDIYEPVSLLGRHENQRILFEDSQSHITAQSKFWSRDYLYVFSEVWANDDSVRMALNVREGTKQQFLRCNWTDLKYTKNIQSVIQYHHNLTNTNLRSLIYCGDVDFSIPHIGTQSWIQSLNLTVKNPWNAWFVDAQVSGASSRSIVNNLPGFGDLPFKLETGYIGVGDKEEIQIFYYFVESQRNPVADPLLVWLVGGPGCSGLSAFFYENGPLLFNYANITGTLPKLELNQNTWTKILNVIYVDVPVGAGFSYSTTPQGYYTDDQRSIENLYEFLQKWLMDHPEFESNPLYIGGGSYSGIFVAPFVQKVYQGSKAGVMALMNIQGYVLASPMTDIFLNINSKVQFAHQLSLIPDKLYESIKASCNGDYVNIDPDNIKCVSDYEAYSELVRGINEENIYEPACLSGHHQNQRILFEDSHITAQSKFWCRVRFYVLSEVWANDDSVRKALNVREGTKQQFLRCNRTDLKYTQNIQSVIQYHHNLTNTNLRSLIYCGDVDFSIPHTGTQSWIQSLNLTVKNPWNAWFVDAQVAGYAEAYENKEFHLTYATVKGAGHVAQHYKPKEVYEMIDRWFSYYPL 1308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00850 1308 Gene3D alpha/beta hydrolase 487 749 IPR029058 -
Bva12g00850 1308 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 10-RELATED 15 449 - -
Bva12g00850 1308 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 10-RELATED 872 1307 - -
Bva12g00850 1308 PRINTS Carboxypeptidase C serine protease (S10) family signature 616 641 IPR001563 GO:0004185|GO:0006508
Bva12g00850 1308 PRINTS Carboxypeptidase C serine protease (S10) family signature 1275 1288 IPR001563 GO:0004185|GO:0006508
Bva12g00850 1308 PRINTS Carboxypeptidase C serine protease (S10) family signature 568 580 IPR001563 GO:0004185|GO:0006508
Bva12g00850 1308 PRINTS Carboxypeptidase C serine protease (S10) family signature 581 591 IPR001563 GO:0004185|GO:0006508
Bva12g00850 1308 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 15 449 IPR001563 GO:0004185|GO:0006508
Bva12g00850 1308 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 497 871 IPR001563 GO:0004185|GO:0006508
Bva12g00850 1308 Gene3D - 314 454 - -
Bva12g00850 1308 Gene3D - 772 878 - -
Bva12g00850 1308 Gene3D - 1164 1307 - -
Bva12g00850 1308 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 872 1307 IPR001563 GO:0004185|GO:0006508
Bva12g00850 1308 SUPERFAMILY alpha/beta-Hydrolases 491 871 IPR029058 -
Bva12g00850 1308 Pfam Serine carboxypeptidase 39 448 IPR001563 GO:0004185|GO:0006508
Bva12g00850 1308 Pfam Serine carboxypeptidase 493 872 IPR001563 GO:0004185|GO:0006508
Bva12g00850 1308 Pfam Serine carboxypeptidase 886 1304 IPR001563 GO:0004185|GO:0006508
Bva12g00850 1308 SUPERFAMILY alpha/beta-Hydrolases 31 448 IPR029058 -
Bva12g00850 1308 Gene3D alpha/beta hydrolase 879 1136 IPR029058 -
Bva12g00850 1308 Gene3D alpha/beta hydrolase 27 288 IPR029058 -
Bva12g00850 1308 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 10-RELATED 497 871 - -
Bva12g00850 1308 SUPERFAMILY alpha/beta-Hydrolases 878 1306 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00850 Bva-Chr12 9499864 9518365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00850 775 871 Calmodulin-binding Proteins AT2G22960 40.206 1.82e-20 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00850 K16296 - mnt:21387510 692.96