Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00841 ATGGCTTCCAGACCTATTGTTCCACAGGAACTTCCCAGAGgtGAAAATAAGCAAAAGAACGTCGTAGCAGAAGGAAGGAACAGACGGGTGCTAGGGGATATTGGTAATCTTGTGGTCAAGCAAGCAGAGAAGCCCAATGCCGACCCATTTAAGCGAATCACAAGGTTGGCTAATGCACATGTCGCAGCAGAGAAGATCaagAAAACAACAACTGAACTTGTGAATGGTCTCCCACCTGTTAAAGGAGTTGGTGAAGAGAATTTCGTTGCAGCAAAAAAGGTGGTAGCAGCTGAGAAAGTTGCTGCAGAGAAGCCACCAGAACATGAAATCATCATCATTAGCTCTGATGATGAATCTGAAGAGGAAAAGGCTAAGGAACATGCTTCGGAAAGAAAGACAAGAGAAAGGTCATCGAGGAAAAATGTGAAGACCCTCAGTTCAATTCTCACTGCTAGAAGCAagGTTGCTTGCGGGCTCACAAACAAGCCAAGGGATCTTGTAGTAGACATTGATGAAGCCGATATTGAAAATGAACTGGCTGCAATTGAATACATTGATGACATCTACAAGTTCTACAAGCTGACAGAGGATGAGAATCGTGTGCGCGATTACATGGGTTCACAACCAGACATAAATGCCAAGATGAGATCAATTCTTGTGGACTGGTTGATAGAAGTGCATCGTAAGTTTGAGCTCATGCCAGAAACTCTTTATCTGACATTGAACGTTGTAGATCGATTCCTGTCCATGAAGGTTGTACCTAGGAGGGAACTTCAACTTGTCGGCATCAGCTCAATGCTAATAGCCTGCAAATATGAGGAGATATGGGCACCAGAGGTTAATGACTTTGTCTGCATATCATATAATGCCTATTCAAGAGAACAGGTTTTGATGATGGAGAAGACAATCTTGGGGAAGCTTGATTGGTATTTGACAGTTCCCACGCCATATGTCTTCCTTTCCCGGTATATCAAAGCCTCTACACCCTCTGATGAGGAGATGGAGAATACCGTGTTTTTCCTTGCCGAGCTTAGTCTGATGCACTATCCTACTGTTGTTCTATACTGCCCATCTCTCATTGCTGCTTCTGCTGTATATGCGACACGATGTACACTCGGTAGAAGCCCTTTCTGGACTGAGACTTTGAGGCACTACACGGGCTATTCTGAGGACCAGCTAAGGGAATGTGCCAAGCTCATGGTCAGCCTTCACTCTGCAGCTCCACAAAGCAAGCTGAGGGCAGTTTACAAGAAATTCTGCAGCACAGATGGTGGTGCTGTAGCTCTCCTATCTGCAGCAAAGAATTTGCAGTG 1313 0.4471 MASRPIVPQELPRGENKQKNVVAEGRNRRVLGDIGNLVVKQAEKPNADPFKRITRLANAHVAAEKIKKTTTELVNGLPPVKGVGEENFVAAKKVVAAEKVAAEKPPEHEIIIISSDDESEEEKAKEHASERKTRERSSRKNVKTLSSILTARSKVACGLTNKPRDLVVDIDEADIENELAAIEYIDDIYKFYKLTEDENRVRDYMGSQPDINAKMRSILVDWLIEVHRKFELMPETLYLTLNVVDRFLSMKVVPRRELQLVGISSMLIACKYEEIWAPEVNDFVCISYNAYSREQVLMMEKTILGKLDWYLTVPTPYVFLSRYIKASTPSDEEMENTVFFLAELSLMHYPTVVLYCPSLIAASAVYATRCTLGRSPFWTETLRHYTGYSEDQLRECAKLMVSLHSAAPQSKLRAVYKKFCSTDGGAVALLSAAKNLQ 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00841 437 Pfam Cyclin, C-terminal domain 314 431 IPR004367 -
Bva12g00841 437 ProSitePatterns Cyclins signature. 216 247 IPR006671 -
Bva12g00841 437 CDD CYCLIN 312 401 IPR013763 -
Bva12g00841 437 SUPERFAMILY Cyclin-like 176 311 IPR036915 -
Bva12g00841 437 Pfam Cyclin, N-terminal domain 187 311 IPR006671 -
Bva12g00841 437 SMART cyclin_7 318 402 IPR013763 -
Bva12g00841 437 SMART cyclin_7 221 305 IPR013763 -
Bva12g00841 437 CDD CYCLIN 215 304 IPR013763 -
Bva12g00841 437 SMART Cyclin_C_2 314 433 IPR004367 -
Bva12g00841 437 Gene3D - 187 428 - -
Bva12g00841 437 MobiDBLite consensus disorder prediction 113 140 - -
Bva12g00841 437 SUPERFAMILY Cyclin-like 315 436 IPR036915 -
Bva12g00841 437 MobiDBLite consensus disorder prediction 1 24 - -
Bva12g00841 437 PIRSF Cyclin_A_B_D_E 6 437 IPR039361 -
Bva12g00841 437 PANTHER CYCLIN-B1-4 20 434 - -
Bva12g00841 437 PANTHER CYCLINS 20 434 IPR039361 -
Bva12g00841 437 Gene3D - 201 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00841 Bva-Chr12 9466096 9466296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00841 14 430 Core Cell Cycle Gene Families AT2G26760 53.589 2.15e-151 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00841 K21777 - gmx:547782 546.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g00841 12 9466096 9466296 Bva12g00841 12 9466096 9466296 ECH