Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00834 ATGCATATCATCAgccaggaaaagaaaagaaaagataatgctGAGCAAAACTCATATTGTCCAACTTGCTTGCGTGGCGTAATTAATAGAACCCGGAAGAAGGACAACCGACCCGAATCTGAGTGCGCCGTCATTGAAGAGTTTGACAACATGAGGAAGAAACTCGATACTCGTTTTCCAGCTGCTCGGATTAAGAAAATCATGCAAACAGATGAGGATGTTGGAAAGATTGCTATGGCTGTGCCTCTTCTAGTTTCTAAAGCACTAGAGCTATTTCTGCAAGATCTATGTAATCGCACATATGAGATAACACTGAGGAGGGGAGCTAAGACCAtgaattcttttcatttAAAGCAGTGTGTACAGACTTTTAACGTCTTTGATTTTCTGAAGGATATTGTCAGCAAGGTTCCTGATTTAGGTGGTTCTGTTGCTACTGGTGATGATCGTACTGTAACTAAGAGAAGGAAAGTTGTTGAAGAAGGGGGCAGTGACAGTGATGATGAGTTGAAGAGAAATAAGATGCAAGAACCAGGACATACAAGTGGCAGAGGAAGAGGTAGGGGCAGGGGTAGAGGTCGTGGACGAGGGAGTAGAACAGTAGATAGAGAAATGACTGCACAACATATCAAGTTTGAAGATGATTTAGAtgcatcaaaacaaaatggcAATCACCATCAAAGTAGTGAAAGTCCGGACAATGATACAGAACCTGAAGACATGAACCATACTATTCCAGTTAACAAACCGGCAGAAGTATCCATGCGAAATTTTGACTTGAATTTAGACCTAGATGAGAACGGGGATTCAGTGGCTGTATCAGCTCCTGCCCAAGATAGTTCATCCGTGGAATTGAAGACAGAACTGAAGCATGAGGAATTCCCTGGCTGGTCCTTGTCTGATGTAGAAAAAATGGCCATTGATCCTTTAGAACTTGCCAACTTAGATAGAAGGATTGATGAAGATGAGGAAGATTATGACGAAGAAAGCTA 992 0.3972 MHIISQEKKRKDNAEQNSYCPTCLRGVINRTRKKDNRPESECAVIEEFDNMRKKLDTRFPAARIKKIMQTDEDVGKIAMAVPLLVSKALELFLQDLCNRTYEITLRRGAKTMNSFHLKQCVQTFNVFDFLKDIVSKVPDLGGSVATGDDRTVTKRRKVVEEGGSDSDDELKRNKMQEPGHTSGRGRGRGRGRGRGRGSRTVDREMTAQHIKFEDDLDASKQNGNHHQSSESPDNDTEPEDMNHTIPVNKPAEVSMRNFDLNLDLDENGDSVAVSAPAQDSSSVELKTELKHEEFPGWSLSDVEKMAIDPLELANLDRRIDEDEEDYDEES 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00834 330 MobiDBLite consensus disorder prediction 195 221 - -
Bva12g00834 330 MobiDBLite consensus disorder prediction 149 184 - -
Bva12g00834 330 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 58 121 IPR003958 -
Bva12g00834 330 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 51 329 - -
Bva12g00834 330 Gene3D Histone, subunit A 45 136 IPR009072 GO:0046982
Bva12g00834 330 PANTHER HISTONE SUPERFAMILY PROTEIN 51 329 - -
Bva12g00834 330 Coils Coil 312 330 - -
Bva12g00834 330 MobiDBLite consensus disorder prediction 140 249 - -
Bva12g00834 330 SUPERFAMILY Histone-fold 68 138 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00834 Bva-Chr12 9434631 9438744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00834 51 319 CCAAT-HAP5 Transcription Factor Family AT3G12480 43.509 1.44e-65 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Bva12g00834 CBFD_NFYB_HMF 3e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00834 K21752 - gmx:100814800 367.081