Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00819 ATGGGAATTTCCTGTGTGAAACCAGTTGCCCATGTTTCCTCCAATTTTTCTGGAAGTTCGAAGTCTAATAGCAGCAAGCCAAATCTGAACTTAAATTCTGCAGATCGACAAACTGGTATAGAGTGTTTGGATCAGTCTCTTAAAGCATCAAATGCTGACAGACCCATTTCCAGTCTTCTCAAGTCCTTCAGCTTCGGTGATCTAAAGGATGCCACGAAAAATTTCCGgcaagaaaatttgattggAGAGGGTGGCTTTGGGCGTGTCTACAAGGGATGGATTGATGAGAACACTTTTGCCCCAACAAAACCAGGGAGTGGGATTGTAGTGGCTGTTAAGAAACTTAAGCCAGAAAGCTTTCAAGGCCACAAGGAATGGCTTGCAGAAGTCAACTATCTAGGCCAGCTCCACCATGAAAATCTGGTGAAATTGATTGGTTATTGCTCGGATTCGACGAACAGGCTTCTGGTTTACGAGTTTATGCAGAAAGGAAGTCTGGAGAATCATTTATTCAGAAAAGGTGTTCAACCGATACCTTGGGCTACAAGGATCAGTATAGCAACCAGTGTTGCAAGAGGCTTAGCATTCTTGCATAGCTTGGACAAAAATGTTATCTATCGCGATTTGAAGGCTTCCAACGTCCTTCTTGATTCAgATTTCAACGCAAAGCTTTCTGATTTTGGTTTGGCAAGAGATGGTCCTACTGGAGATAAAACTCACGTTTCAACCAGAGTTCTTGGAACTCAAGGTTATGCTGCACCCGAGTATGTAGCTACAGGTCACTTGACTCCAAGAAGTGATGTATATAGCTTTGGCGTTGTATTACTAGAATTACTCACGGGAAGACGTGCAGTAGATGATGAGAAAGCTGGGTCCTCAGAAGAAACTCTGGTGGATTGGGCAAAACCATTCCTAAGTGACAGCAAAAGGGTTCTAAGAATCATGGACACTAGGTTAGGTGGTCAATACCCAAGGAGAGAAGCTCAAGCTGCAGCTTCACTTTCATTGCAGTGCCTGGACAGTGATCCCAAATACAGACCACCTATGAAGGATGTTCTGGCAACATTGGAAGGAATCCGTTCCTCAAATTCATTGCCGAGGACCCCAAAGTCTGGAACTGGCAGTCATTCCCAAAAGATGGCTGTGAATACAAACTG 1157 0.4339 MGISCVKPVAHVSSNFSGSSKSNSSKPNLNLNSADRQTGIECLDQSLKASNADRPISSLLKSFSFGDLKDATKNFRQENLIGEGGFGRVYKGWIDENTFAPTKPGSGIVVAVKKLKPESFQGHKEWLAEVNYLGQLHHENLVKLIGYCSDSTNRLLVYEFMQKGSLENHLFRKGVQPIPWATRISIATSVARGLAFLHSLDKNVIYRDLKASNVLLDSDFNAKLSDFGLARDGPTGDKTHVSTRVLGTQGYAAPEYVATGHLTPRSDVYSFGVVLLELLTGRRAVDDEKAGSSEETLVDWAKPFLSDSKRVLRIMDTRLGGQYPRREAQAAASLSLQCLDSDPKYRPPMKDVLATLEGIRSSNSLPRTPKSGTGSHSQKMAVNTN 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00819 385 ProSitePatterns Protein kinases ATP-binding region signature. 81 114 IPR017441 GO:0005524
Bva12g00819 385 CDD STKc_IRAK 81 359 - -
Bva12g00819 385 MobiDBLite consensus disorder prediction 359 385 - -
Bva12g00819 385 Gene3D Transferase(Phosphotransferase) domain 1 161 374 - -
Bva12g00819 385 PANTHER TYROSINE KINASE FAMILY PROTEIN 18 380 - -
Bva12g00819 385 ProSiteProfiles Protein kinase domain profile. 75 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00819 385 Gene3D Phosphorylase Kinase; domain 1 56 160 - -
Bva12g00819 385 SUPERFAMILY Protein kinase-like (PK-like) 52 356 IPR011009 -
Bva12g00819 385 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Bva12g00819 385 Pfam Protein tyrosine and serine/threonine kinase 78 355 IPR001245 GO:0004672|GO:0006468
Bva12g00819 385 PANTHER OS01G0588500 PROTEIN-RELATED 18 380 - -
Bva12g00819 385 SMART serkin_6 75 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00819 Bva-Chr12 9337324 9340193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00819 43 356 Glycoside Hydrolase AT3G07070 50.157 1.65e-103 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bva12g00819 PK_Tyr_Ser-Thr 6.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00819 - - gmx:102664409 578.17