Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00818 ATGAGTCAGGCTAAAGTCAAGCGCCGAGTGGGTAAATATGAGATGGGGAGGACAATTGGTGAGGGAACCTTTGCAAAGGTGAAATTTGCAAGGAACTCTGAGACTGGAGAGCCTGTGGCTCTTAAGATTCTTGACAAAGAGAAGGTTCTCAAGCACAAGATGGCTGAACAGATCAAGCGGGAAGTAGCAACAATGAAGTTGATAAAGCATCCAAATGTTGTTCAATTATATGagGTCATGGGGAgcaagacaaaaatatatcttgTTTTGGAGTTTGTGACTGGGGGCGAGctctttgataaaattGTAAACCATGGACGAATGAGTGAAGATGAAGCACGTAGATATTTCCAGCAGCTCATAAATGCTGTTGATTATTGCCATAGCAGGGGTGTCTACCACCGAGACCTAAAGCCAGAAAATTTGCTATTAGATGTTTATGGCCACCTTAAAGTTTCTGATTTTGGGTTAAGCGCACTATCCCAGCAAGTCAGGGATGATGGCCTGCTTCATACCACATGTGGAACTCCAAATTATGTTGCTCCTGAGGTCCTTGAAGATAGAGGCTATGATGGGGCAACTGCAGATTTGTGGTCATGCGGAGTGATTCTCTTTGTATTGCTTGCAGGTTACTTGCCTTTTGATGACTCTAATATTATGAACCTCTATAAAAAAATATCAGTTGCTGATTTTACTTGCCCCCCATGGCTCTCTTTCAGTGCCAGGAAATTGATAACTCGAATCTTGGACCCCAACCCCATGACTCGGATCACTATTCCTGAAATTCTAGAAGATGAATGGTTTAAGAAAGATTATAAGTCTCCCGTGTTCGATGAGAAAGGGGAGACCAACCTTGATGATGTAGAAGCTGTCTTTAAGGATTCTGAAGAGCATCATGTGacagagaagaaggaagaacaGCCAACAGCTATGAATGCATTTGACCTAATCTCCATGTCTAAAGGGCTGAACCTTGAAAACTTGTTTGATATCGAGAAGGGATTTAAAAGGGAAACAAGGTTCACATCAAAATGCCCTGCCAATGAGATAATTAACAAGATAGAAGAAGCTGCAAAACCTCTTGGTTTTGATGTgaggaagaaaaattacaagATGAGGCTTGAGAATGTGAAAGCTGGAAGGAAAGGAAACCTTAATGTTGCTACAGAGGTATTTCAAGTAACACCTTCTCTTCACATGGTTGAAGTGCGGAAAGCAAAAGGCGATACATTGGAATTCCACAAGTTCTACAAGAATCTTTCAACTTGCCTAGACGATGTTGTTTGGAAAACTGAAGACGACATGCGAGAAACAAAATG 1319 0.3965 MSQAKVKRRVGKYEMGRTIGEGTFAKVKFARNSETGEPVALKILDKEKVLKHKMAEQIKREVATMKLIKHPNVVQLYEVMGSKTKIYLVLEFVTGGELFDKIVNHGRMSEDEARRYFQQLINAVDYCHSRGVYHRDLKPENLLLDVYGHLKVSDFGLSALSQQVRDDGLLHTTCGTPNYVAPEVLEDRGYDGATADLWSCGVILFVLLAGYLPFDDSNIMNLYKKISVADFTCPPWLSFSARKLITRILDPNPMTRITIPEILEDEWFKKDYKSPVFDEKGETNLDDVEAVFKDSEEHHVTEKKEEQPTAMNAFDLISMSKGLNLENLFDIEKGFKRETRFTSKCPANEIINKIEEAAKPLGFDVRKKNYKMRLENVKAGRKGNLNVATEVFQVTPSLHMVEVRKAKGDTLEFHKFYKNLSTCLDDVVWKTEDDMRETK 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00818 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Bva12g00818 439 Pfam Protein kinase domain 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00818 439 ProSiteProfiles Protein kinase domain profile. 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00818 439 ProSiteProfiles NAF domain profile. 306 330 IPR018451 GO:0007165
Bva12g00818 439 Gene3D Transferase(Phosphotransferase) domain 1 93 276 - -
Bva12g00818 439 Pfam NAF domain 308 367 IPR004041 GO:0007165
Bva12g00818 439 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 2 432 - -
Bva12g00818 439 Gene3D Kinase associated domain 1, KA1 305 430 - -
Bva12g00818 439 SUPERFAMILY Protein kinase-like (PK-like) 9 285 IPR011009 -
Bva12g00818 439 PANTHER - 2 432 - -
Bva12g00818 439 CDD STKc_SnRK3 12 267 - -
Bva12g00818 439 SMART serkin_6 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00818 439 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Bva12g00818 439 CDD CIPK_C 312 421 - -
Bva12g00818 439 Gene3D Phosphorylase Kinase; domain 1 2 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00818 Bva-Chr12 9324803 9329974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00818 3 411 CBL-interacting serine-threonine protein kinases AT2G26980 80.929 0.0 698
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Bva12g00818 Pkinase 5.5e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00818 - - rcu:8279866 832.402