Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00813 ATGGGGATTCAAACAATGGGTTCTCAAGGTAATGGACAGCAGTCTCATTTACAGCCTTCCCCTTTAGCAAGGCAAAGCTCTTGGTACAATCTCACTCTTGATGAGGTTAAACATCAACTAGGAGATTTGGGGAAACCGTTGGGGAGCATGAATCTCGATGAGCTTCTTGAAAGTGTATGGACTGCTGAAGCAAGTAAATCTGTCGGGATAGAAAATGAGAACATGTCATCATCATCTCTTCAACGTCAAGCCAGTCTGACCTTGGCTAGGGCTTTAAGTGGGAAAACAGTGGATGATGTCTGGAGAGAAATCCAACAAGGTCAGAAGAAACGGTATGGAGAGAACATGAAAAATCAGGATAGAGAAATGACTCTTGGTGAGACCACTTTAGAGGACTTCTTGGTACAAGCTGGGCTTTTTGCTGAAGCTTCTATAACTCCTGCTGTGGCATTTGATGCAATGGATGTCATGACCCCTCAAAGTTCTCAACAAAATATGGGCTTGTCACCCTCCCCTTCAATTGGCAGTTTATCAGATTCAAGACCTGGTCGGAAAAGAGATACTCCAGATGGATATGAGAAAACTCTGGAAAGGAGGCTGAGGAGGAAAATCAAGAATAGGGAATCTGCTGCCCGTTCACGGGCCAGAAAGCAgGCTTACCATAATGAGCTGGTTAGCAAAGTTTCTCGTCTagaagaagataatataaagctcaagaaagaaaagGAATTTGAGAAGAAGTTGCCTTCTGAATCATCACCTGAACCAAAATATCAGCTTCGAAGAACAAGTTCTGCCTCGTTCTG 806 0.4218 MGIQTMGSQGNGQQSHLQPSPLARQSSWYNLTLDEVKHQLGDLGKPLGSMNLDELLESVWTAEASKSVGIENENMSSSSLQRQASLTLARALSGKTVDDVWREIQQGQKKRYGENMKNQDREMTLGETTLEDFLVQAGLFAEASITPAVAFDAMDVMTPQSSQQNMGLSPSPSIGSLSDSRPGRKRDTPDGYEKTLERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEDNIKLKKEKEFEKKLPSESSPEPKYQLRRTSSASF 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00813 268 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 201 216 IPR004827 GO:0003700|GO:0006355
Bva12g00813 268 Coils Coil 221 248 - -
Bva12g00813 268 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 196 241 IPR004827 GO:0003700|GO:0006355
Bva12g00813 268 SMART brlzneu 194 266 IPR004827 GO:0003700|GO:0006355
Bva12g00813 268 MobiDBLite consensus disorder prediction 160 223 - -
Bva12g00813 268 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 36 266 IPR043452 GO:0003700|GO:0045893
Bva12g00813 268 MobiDBLite consensus disorder prediction 180 204 - -
Bva12g00813 268 Gene3D - 196 250 - -
Bva12g00813 268 SUPERFAMILY Leucine zipper domain 198 244 IPR046347 GO:0003700|GO:0006355
Bva12g00813 268 MobiDBLite consensus disorder prediction 241 268 - -
Bva12g00813 268 MobiDBLite consensus disorder prediction 1 21 - -
Bva12g00813 268 CDD bZIP_plant_BZIP46 198 235 - -
Bva12g00813 268 Pfam bZIP transcription factor 198 243 IPR004827 GO:0003700|GO:0006355
Bva12g00813 268 PANTHER BZIP TRANSCRIPTION FACTOR 36 266 - -
Bva12g00813 268 MobiDBLite consensus disorder prediction 160 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00813 Bva-Chr12 9294423 9298693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00813 22 268 bZIP Transcription Factor Family AT3G56850 48.070 2.30e-68 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bva12g00813 bZIP_1 1.4e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00813 K14432 - gmx:100798549 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g00813 12 9294423 9298693 Bva12g00813 12 9294423 9298693 ECH