Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00806 ATGGATTCCTTTGAACCTGATGGAAATGGAAAAGAGGAAGCTTTTCTGCCAGCTTGTCTTAACGGAGATGAGGGTGCTTTGCCACCACCCCCTCCTGTTGTCCCGCCGGATGTTGTTCCGGTGAAGGCTGAATCAGACCTCCCTCCTCAACAAGTTAAGAAAAAGTCTTCCTGGCTACCGATGGCTAGACGTGGCCTGGCTTCcagaggaaataaaatatctcttcTTACTAATCACTTTAAAGTCAATGTTTCTAAGACTGATGGGCATTTCTTCCATTATAGTGTGGCTCTTTCCTATGAAGATGGGCGACCTGTCGAAGGTAAGGGAGTGGGGAGAAAAGTAATTGACAGGGTTCGGGAGACTTATGGTGATGAGCTAAATGGAAAGACTTTTGCCTATGATGGCGAAAAGAGTTTGTTTACTATTGGTCCTCTTCCGCGAAACAAGCTCGAATTTACAGTTCTTCTGGAGGAAATGACTTCAAACAGAAATAATGGTAATTGCAGCCCTGATGGGCATGGAAGTCCTAATGAGTGTGACAGGAAGAGGATGCGGCGGCCATTTAGGTCCAAATCATATAAAGTTGAGATTACCTTTGCTGCAAAAATTCCCATGCAGGCCATTGCCTTGGCTCTACGTGGCCAAGAATCTGAGAATTTCCAGGAAGCTATTAGAGTGCTTGATATTATACTAAGGCAACATGCTGCTAAGCAAGGCTGCTTGCTGGTTCGGCAATCCTTTTTCCACAACGACCCAAGGAATTTTGCTGATGTAGGTGGTGGAGTTCTTGGCTGCAGAGGATTTCATTCAAGTTTCCGAACCACACAGGGTGGCTTGTCCCTTAATATTGATGTCTCAACTACCATGATAATACAACCCGGACCGGTAGTGGACTTCTTAATTGCCAACCAAAATGCTAgaaatccattttctcttgACTGGACAAAGGCCAAACGGGTGCTTAAAAATCTGAGGATTACAACAAGCCCATCCAATCAAGAGTACAAGATAACTGGTCTTTCTGAAAGACCCTGCCGAGAGCAAATGTTTACTCTGAAGAACAAAGGTTGTGGAGAGGATGATACTTTGGAAGTGACtgtttatgattattttgtcAATCATCGGAACATAGATCTCCGCTATTCTGCTGATTTGCCTTGTATTAATGTTGGGAAACCAAAGCGTCCAACTTATTTCCCCATTGAGCTTTGCTCTTTGGTGTCTTTGCAGCGGTATACCAAAGCTCTGACCACACTTCAAAGGGCTTCACTAGTGGAAAAATCCAGACAGAAGCCTCAAGAGAGGATGAAGGTTTTGACTGATGCTCTAAAATTCAACAACTATGATGGTGAACCTATGCTCCGTAATTGTGGAATATCCATAAGCTCTGGCTTTACACAAGTAGAGGGTCGGGTTTTGCAAGCTCCTAGGTTGAAGGTTGGCCAAGGGGAAGAATTGTTTCCTAGGAATGGGAGATGGAATTTCAATAATAAGAAATTTGTGCAGCCGACGAAGATAGAACGATGGGCTGTGGTGAATTTCTCAGCACGCTGTAATGTACAACAAATTGTGCTGGATTTGATTAGAATTGCAGATATGAAAGGAATTTCCATAGATAAGCCATTTGATGTGTTTGAGGAAAACCCTCAGTTTAGGCGTGCTCCGCCTTTGGTTCGAGTGGAGAAGATGTTTGAGGAAATCCAGTCTAAGCTTCCTGGGGCAcctcaatttcttctttgtctGCTTCCGGACCGGAAGAACTGTGATATTTATGGACcttggaaaaagaagaatctttCTGACTTTGGAATTGTCAATCAATGCATGTGTCCCATGAGGGTCAATGATCAATATCTTACCAATATTCTGTTGAAGATCAATGCCAAGCTTGGGGGTTTGAATTCGTTGTTGTCAGTTGAACATTCTCCATCCATTCCTGTTGTGTCCAAAGCTCCTACAATCATTCTTGGCATGGATGTATCGCATGGCTCACCCGGGCAGTCTGATATTCCATCAATTGCTGCGGTGGTGAGCTCCAGACAATGGCCTCTGATATCTAAGTACAGGGCATGTGTTCGTACACAGTCTCCAAAGGTCGAAATGATTGATAACTTATTCAAGCCAGTATCTGATAAGGAAGACGAAGGCATTATGAGGGAACTTCTGGTTGATTTCTACGTAAGTTCCGGGAAGAGGAAACCGGAAAATATCATCATATTCAGGGATGGAGTCAGTGAGTCCCAGTTCGTCCAAGTTTTGAACGTTGAACTCAATCAAATCATCGAGGCCTGCAAATTTCTTGATGAGAAATGGGAACCCAAATTTACGGTAATTGTCGCCCAAAAAAACCATCACACAAAATTTTTCCAGCCTACATCTCCAGACAATGTGCCCCCTGGTACTGTCATCGATAATAAAATTTGCCATCCGCGCAATTATGATTTTTACATGTGTGCACATGCTGGAATGATTGGAACTAGTAGGCCTACCCATTACCATGTTCTGATGGATGAGATTGGCTTCTCCCCTGATGATCTACAGGAACTTGTGCATTCACTATCCTATGTGTATCAGAGGAGCACCACTGCCATATCTGTTGTTGCACCAATATGCTATGCACACTTGGCGGCTACCCAGATGGGACAGTTCATGAAATTTGAGGACAAGTCTGAGACATCTTCTAGCCATGGTGGGCTTACAGCTCCTGGAACTCCTGCTGTCCCTCCAATGCCAAAACTGAATGAAAATGTCTGCAACTCTATGTTCTTCTGTTG 2777 0.4264 MDSFEPDGNGKEEAFLPACLNGDEGALPPPPPVVPPDVVPVKAESDLPPQQVKKKSSWLPMARRGLASRGNKISLLTNHFKVNVSKTDGHFFHYSVALSYEDGRPVEGKGVGRKVIDRVRETYGDELNGKTFAYDGEKSLFTIGPLPRNKLEFTVLLEEMTSNRNNGNCSPDGHGSPNECDRKRMRRPFRSKSYKVEITFAAKIPMQAIALALRGQESENFQEAIRVLDIILRQHAAKQGCLLVRQSFFHNDPRNFADVGGGVLGCRGFHSSFRTTQGGLSLNIDVSTTMIIQPGPVVDFLIANQNARNPFSLDWTKAKRVLKNLRITTSPSNQEYKITGLSERPCREQMFTLKNKGCGEDDTLEVTVYDYFVNHRNIDLRYSADLPCINVGKPKRPTYFPIELCSLVSLQRYTKALTTLQRASLVEKSRQKPQERMKVLTDALKFNNYDGEPMLRNCGISISSGFTQVEGRVLQAPRLKVGQGEELFPRNGRWNFNNKKFVQPTKIERWAVVNFSARCNVQQIVLDLIRIADMKGISIDKPFDVFEENPQFRRAPPLVRVEKMFEEIQSKLPGAPQFLLCLLPDRKNCDIYGPWKKKNLSDFGIVNQCMCPMRVNDQYLTNILLKINAKLGGLNSLLSVEHSPSIPVVSKAPTIILGMDVSHGSPGQSDIPSIAAVVSSRQWPLISKYRACVRTQSPKVEMIDNLFKPVSDKEDEGIMRELLVDFYVSSGKRKPENIIIFRDGVSESQFVQVLNVELNQIIEACKFLDEKWEPKFTVIVAQKNHHTKFFQPTSPDNVPPGTVIDNKICHPRNYDFYMCAHAGMIGTSRPTHYHVLMDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKFEDKSETSSSHGGLTAPGTPAVPPMPKLNENVCNSMFFC 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00806 925 Gene3D - 473 639 - -
Bva12g00806 925 Pfam Argonaute linker 1 domain 244 292 IPR014811 -
Bva12g00806 925 SMART DUF1785_2 242 294 IPR014811 -
Bva12g00806 925 Pfam N-terminal domain of argonaute 72 232 IPR032474 -
Bva12g00806 925 Pfam Mid domain of argonaute 489 540 IPR032473 -
Bva12g00806 925 Gene3D - 645 925 IPR036397 GO:0003676
Bva12g00806 925 ProSiteProfiles Piwi domain profile. 578 886 IPR003165 GO:0003676
Bva12g00806 925 SUPERFAMILY Ribonuclease H-like 562 884 IPR012337 -
Bva12g00806 925 CDD Piwi_ago-like 453 880 IPR045246 -
Bva12g00806 925 MobiDBLite consensus disorder prediction 164 183 - -
Bva12g00806 925 MobiDBLite consensus disorder prediction 24 38 - -
Bva12g00806 925 Pfam Piwi domain 579 886 IPR003165 GO:0003676
Bva12g00806 925 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 2 924 - -
Bva12g00806 925 MobiDBLite consensus disorder prediction 1 56 - -
Bva12g00806 925 Pfam Argonaute linker 2 domain 435 480 IPR032472 -
Bva12g00806 925 Gene3D paz domain 288 413 - -
Bva12g00806 925 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 2 924 - -
Bva12g00806 925 CDD PAZ_argonaute_like 294 408 - -
Bva12g00806 925 Pfam PAZ domain 298 425 IPR003100 GO:0005515
Bva12g00806 925 SUPERFAMILY PAZ domain 289 450 IPR036085 GO:0005515
Bva12g00806 925 ProSiteProfiles PAZ domain profile. 319 409 IPR003100 GO:0005515
Bva12g00806 925 SMART Piwi_a_2 578 886 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00806 Bva-Chr12 9262595 9269606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00806 52 925 Eukaryotic Initiation Factors Gene Family AT5G43810 36.114 2.80e-169 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00806 K11593 - qsu:111991924 1554.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g00806 12 9262595 9269606 Bva12g00806 12 9262595 9269606 ECH