Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00802 ATGCTTGGAGTAGGAGTTGTTGGGGGAGGCATGCAGGCTACCTGTTTGATGTTATTCTTGTTAGTGGTGGTTGCATTGGGGAATTCAGATTTTGATGCACTCCTGGAACTCAAGAAGAGCATTGAGAAAGACCCTTCTGGACTAGTTGTTACTTCTTGGGATTCCAAGTCTCTAGCTTCTGATGGATGTCCACAGAATTGGTATGGTATATTGTGTAGTGAAGGCAAAGTTGTATCAATCACTCTGAATGACGTTGGTTTGGTTGGGGAATTTAATTTCCAAGCTATTAACGGCCTTACAATGCTTCGCAACTTGTCAGTTATGAACAATTTGTTCACAGGAAGTATCTCACATATTGGCCCAATGGAGTCACTTGAATTTCTTGATCTATCAGGCAACAAGTTTGATGGGTTTTTACCCTCTGATTTGGTTAAGCTgaacaatttaatatatttgaatgttTCTTCAAATGAATTTGAAGGTACTTTTCCTGTTGGCTTTGGCAAACTTGAGCGGTTGAAGTACTTAGATTTGCGTGCTAATAGCTTCTCTGGGGATATTATGCATATCTTCTCTCAGATGGGCAGTGTGGTGTATGTTGACCTAAGCGGAAACAAGTTTTCTGGTTCACTGGATTTGGGGCTTGCCAATAACTCCTTCCTCTCCtcaattcaatatttaaatattagccATAATTCCTTGACTGGTCAGCTATTTGCTCATGATGGAATGCCTTACCTTGACAATTTAGCGGTCTTTGATGCTAGCAATAATCAGTTGGAGGGCACTATACCTTCCTTCAACTTTGTTGTATCTCTCCAGGTCCTTCGGCTTGGATGCAACAAACTATCAGGTTCTCTGCCAGAAACTTTATTGCAGGATAATTCAATGATGTTGTCTGAACTGGATCTTAGTCAGAACAAGCTCGAAGGTCCCATTGGAAGTATAACATCTGTAACTCTGAAGAAGCTTAATATATCTTCAAACAAACTGTCTGGTCCATTGCCTCGCAGAGTGTCCCACTGTGCTATCATTGATTTAAGTAATAACATGCTGTCTGGTAACTTGTCTAGGATCCAGTATTGGGGTAATTATGTGGAAGTTATACAGCTAAGTTCAAATTTGTTGACAGGAATGCTGCCAAACCAAACTTCTCAGTTTTTAAGGCTATCAGTGCTTAAGATATCCAATAACTCATTGGAGGGTGTTCTACCAACGGTACTAGGAACATACTCAGAACTGAAAGAGATTGATCTCAGTGCCAACCTGCTTTCTGGTTTCCTCCTTCCAGGCTTTTTCACCTCCACCAAATTGACTGAAATTAACCTCTCAGGCAACAAGTTTTCTGGACCAATACCTATTCAACAAATTCCTAATGATCCATTAGTTTCTGCTGAAAATTTTAGTCTGGTTTCTCTTGATCTTTCATTTAACAACTTGAGTGGGCACCTTCCTCCAGAAATAAGCAAGCTTCACAATTTGGCATATCTCAATCTATGTAACAACAAATTTGAAGGTACTATTCCTGATGGCCTTCCAGACAAACttaaaggatttaatgtgtcctTCAATAATCTCTCTGGTACTGTTCCTGATAGCTTAAAGAGCTTTCCTGAATCAGCATTTCATCCAGGGAattcttttcttatgtttCCACATTCATTGCTACCTCCAAAAGAGCATGCTGGTCACAGTTTGAAGAAAGAGGGATCACATATGAAATCTGTAATTTGGATTGTTGTGATTGCACTTTTGGTTTCTATTGCTTCTTTGATGGCCATTGCTGGTATAATAAGTTATTTCAAGAAAGATAGGACTTCTAGACGAAATGGAGCAAAAGAAATTGGCCCAGGGAGTTCTTCTATGTCCAGTAGAGATGCACCCAAAAGAAATGTGGAACCATCTTCTCCATCGAGTTATGATCCAAATTGCTTACCTTCATTACAAATGAGGTCTGCTGAAGATgcccaaaatatatatgctatgGTAAAGAAACCAAAAGATTTCAGCCATGCTGACTCATTTAAGAATGAAGAAGGAATGCCTTCCCCAATGTCTGTTTTATCGATTTCAAATCCTTCATCTTCTAGAAGTCATCCATTTGAGAATCCTGGTGCCCTTAAAATATGCTCTCCGCATACATTGGCAGGGGATTTGCATCTATTTGATGGCTCCTTGGTGCTCACTGCAGAAGAATTTTCATGTGCTCCAGCAGAAGTTATTGGTAGGAGTTGTCATGGTGCACTGTACAAAGCTACCCTTAAGTCTGGTCATGTATTGGCTGTCAAATGGTTAAAGGATGGAATAGCTAAAGGTAAGAAGGAGTTTGTAAGGGAAGTAAAGAAACTTGGGACTATTAGGCATCCAAATCTGGTTTCTGTTCAGGGTTACTACTGCGGCCCAAAGGAGCACGAGAAACTGGTTATATCAAATTATGTCAATGCACTATCTTTGGACATTTTTCTTCGTGAGGCAGGTAAAGAAAGTGTCCATCTGCTATCTCTTGATGAAAGGCTTAGGGTAGCCGTAGACGTAGCCCGGTGTCTACATTACCTACACAGTGAGAAAGCTATACCACATGGCAATCTGAAATCCACCAACATTCTCCTGGAAACTCCTAACCGGAATGTACTGCTCACTGATTACAGCCTACATAGATTGTTAACTGCTGCTGGTACTGCTGAGCAAGTTTTAAATGCAGGTGCTCTTGGTTATCTACCTCCTGAATTTTCCAGCTCAAGCAAACCTAGCCCATCATTGAAGAGTGATGTCTTTGCATTTGGTGTCACCTTGTTAGAGCTCCTAACAGGAAGAACTTCTGGGGAAATTGTTTCTGGGATTCCAGGGGTTGTTGACCTGACAGACTGGATCAGGTTTTTGGCAGAAAGAAATCGTTCCGGCGAGTGCTTTGACAGGCTGCTACTAGACAAGCACCGCGGGGAACGGCCGGCTAGAGTTCTTGATGATATGCTAAAGGTGGCTCTTAGATGCATCCTTCCAGCACCAGAGAGGCCTGACATGAAAACAGTTTTTGAAGATCTTTCAATTATAAGGTA 3056 0.4012 MLGVGVVGGGMQATCLMLFLLVVVALGNSDFDALLELKKSIEKDPSGLVVTSWDSKSLASDGCPQNWYGILCSEGKVVSITLNDVGLVGEFNFQAINGLTMLRNLSVMNNLFTGSISHIGPMESLEFLDLSGNKFDGFLPSDLVKLNNLIYLNVSSNEFEGTFPVGFGKLERLKYLDLRANSFSGDIMHIFSQMGSVVYVDLSGNKFSGSLDLGLANNSFLSSIQYLNISHNSLTGQLFAHDGMPYLDNLAVFDASNNQLEGTIPSFNFVVSLQVLRLGCNKLSGSLPETLLQDNSMMLSELDLSQNKLEGPIGSITSVTLKKLNISSNKLSGPLPRRVSHCAIIDLSNNMLSGNLSRIQYWGNYVEVIQLSSNLLTGMLPNQTSQFLRLSVLKISNNSLEGVLPTVLGTYSELKEIDLSANLLSGFLLPGFFTSTKLTEINLSGNKFSGPIPIQQIPNDPLVSAENFSLVSLDLSFNNLSGHLPPEISKLHNLAYLNLCNNKFEGTIPDGLPDKLKGFNVSFNNLSGTVPDSLKSFPESAFHPGNSFLMFPHSLLPPKEHAGHSLKKEGSHMKSVIWIVVIALLVSIASLMAIAGIISYFKKDRTSRRNGAKEIGPGSSSMSSRDAPKRNVEPSSPSSYDPNCLPSLQMRSAEDAQNIYAMVKKPKDFSHADSFKNEEGMPSPMSVLSISNPSSSRSHPFENPGALKICSPHTLAGDLHLFDGSLVLTAEEFSCAPAEVIGRSCHGALYKATLKSGHVLAVKWLKDGIAKGKKEFVREVKKLGTIRHPNLVSVQGYYCGPKEHEKLVISNYVNALSLDIFLREAGKESVHLLSLDERLRVAVDVARCLHYLHSEKAIPHGNLKSTNILLETPNRNVLLTDYSLHRLLTAAGTAEQVLNAGALGYLPPEFSSSSKPSPSLKSDVFAFGVTLLELLTGRTSGEIVSGIPGVVDLTDWIRFLAERNRSGECFDRLLLDKHRGERPARVLDDMLKVALRCILPAPERPDMKTVFEDLSIIR 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00802 1018 MobiDBLite consensus disorder prediction 684 698 - -
Bva12g00802 1018 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 11 1017 - -
Bva12g00802 1018 SUPERFAMILY L domain-like 59 354 - -
Bva12g00802 1018 SMART LRR_typ_2 270 294 IPR003591 -
Bva12g00802 1018 SMART LRR_typ_2 491 515 IPR003591 -
Bva12g00802 1018 SMART LRR_typ_2 221 241 IPR003591 -
Bva12g00802 1018 SMART LRR_typ_2 122 146 IPR003591 -
Bva12g00802 1018 SUPERFAMILY Protein kinase-like (PK-like) 738 1014 IPR011009 -
Bva12g00802 1018 Gene3D Phosphorylase Kinase; domain 1 724 812 - -
Bva12g00802 1018 PANTHER OS07G0626500 PROTEIN 11 1017 - -
Bva12g00802 1018 MobiDBLite consensus disorder prediction 671 698 - -
Bva12g00802 1018 SUPERFAMILY RNI-like 320 536 - -
Bva12g00802 1018 Pfam Leucine rich repeat 148 207 IPR001611 GO:0005515
Bva12g00802 1018 Pfam Leucine rich repeat 389 448 IPR001611 GO:0005515
Bva12g00802 1018 Gene3D Ribonuclease Inhibitor 213 556 IPR032675 -
Bva12g00802 1018 Gene3D Ribonuclease Inhibitor 27 212 IPR032675 -
Bva12g00802 1018 Gene3D Transferase(Phosphotransferase) domain 1 816 1018 - -
Bva12g00802 1018 Pfam Protein tyrosine and serine/threonine kinase 739 1014 IPR001245 GO:0004672|GO:0006468
Bva12g00802 1018 MobiDBLite consensus disorder prediction 608 646 - -
Bva12g00802 1018 Pfam Leucine Rich Repeat 124 146 IPR001611 GO:0005515
Bva12g00802 1018 ProSiteProfiles Protein kinase domain profile. 735 1016 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00802 1018 MobiDBLite consensus disorder prediction 613 646 - -
Bva12g00802 1018 Pfam Leucine rich repeat N-terminal domain 28 73 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00802 Bva-Chr12 9216575 9221577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00802 102 610 Receptor kinase-like Gene Family AT5G07280 29.754 5.72e-40 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bva12g00802 PK_Tyr_Ser-Thr 1.3e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00802 - - ccaj:109792420 1434.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g00802 12 9216575 9221577 Bva12g00802 12 9216575 9221577 ECH