Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00801 ATGATCACCGATGAGATGCCCACGCGAGCTCTCGAAGCCGGCGGCGACGTAAACGACGATGCAGCTTTCACCAACATTctaattgcttttctttcattgctGGTCTTCCTTGGCCTCGTTTCCATTGCCTTATTAGTAGCCATCTGGAGTTATGGGTCTCGTGGAATGCCCAGAAAACGTTCTGGGCAAACCCAGAACAATAATGGAGATTCAAGTGGGCAATTGATGTCGTTTTCTGAGCTGAGAAGAAGTAGGGTTTTTAAGGAGTCGTTTTGCTCAATTTGCAGACGTGACTACTTGAACAATGAGAGTGTAAAAGTGATGCCTTGTGGGCATGTTTTTCATCCTCGTTGTGTTGAAGCTTGGTTGTGCAGCAAACGTTCTTGCCCTAACTGTCGAGGACTTATATA 410 0.4415 MITDEMPTRALEAGGDVNDDAAFTNILIAFLSLLVFLGLVSIALLVAIWSYGSRGMPRKRSGQTQNNNGDSSGQLMSFSELRRSRVFKESFCSICRRDYLNNESVKVMPCGHVFHPRCVEAWLCSKRSCPNCRGLI 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00801 136 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 56 136 IPR013083 -
Bva12g00801 136 SMART ring_2 92 132 IPR001841 -
Bva12g00801 136 ProSiteProfiles Zinc finger RING-type profile. 92 133 IPR001841 -
Bva12g00801 136 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 10 133 - -
Bva12g00801 136 SUPERFAMILY RING/U-box 86 135 - -
Bva12g00801 136 Pfam Ring finger domain 92 133 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00801 Bva-Chr12 9215002 9215412 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00801 82 133 C3H Transcription Factor Family AT4G10150 45.283 1.53e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00801 - K10664 bdi:100841820 67.0106