Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00792 ATGGTTGCCGCCAAGAAGACCAAGAAGACCCATGAGTCTATCAATAACAGACTCGCTCTTGTGATGAAGAGTGGGAAGTACACCTTGGGATATAAGACTGTGCTGAAATCCCTCAGAAACTCCAAAGGGAAGCTTGTGATAATTGCTAACAACTGCCCGCCTCTAAGGAAATCGGAAATTGAGTATTATGCTATGCTTTCAAAAGTGGGAGTTCACCACTACAACGGAAACAATGTGGACTTGGGCACAGCCTGTGGGAAATATTTCAGAGTGTGCTGCCTAAGCATCATTGATCCAGGTGATTCTGATATCATCAAGAGCATGCCTGGTGAACATTG 338 0.4467 MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRNSKGKLVIIANNCPPLRKSEIEYYAMLSKVGVHHYNGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKSMPGEH 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00792 112 ProSitePatterns Ribosomal protein L30e signature 2. 80 100 IPR022991 -
Bva12g00792 112 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 13 105 IPR004038 -
Bva12g00792 112 PANTHER 60S RIBOSOMAL PROTEIN L30 1 111 - -
Bva12g00792 112 Hamap 50S ribosomal protein L30e [rpl30e]. 12 109 IPR000231 GO:0003723|GO:0003735|GO:0022625
Bva12g00792 112 Gene3D - 2 108 IPR029064 -
Bva12g00792 112 ProSitePatterns Ribosomal protein L30e signature 1. 24 48 IPR022991 -
Bva12g00792 112 SUPERFAMILY L30e-like 13 106 IPR029064 -
Bva12g00792 112 PANTHER RIBOSOMAL PROTEIN L30 1 111 IPR039109 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00792 Bva-Chr12 9169516 9171347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00792 1 112 Cytoplasmic Ribosomal Protein Gene Family AT1G36240 84.821 1.62e-70 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00792 K02908 - jre:109020673 227.639