Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00787 ATGGACATTCAAGTGATCAATGTGGAAGATGGAAGGGACCAGCAAGCTGGAGCAGATGATGGGGATGCTGAACCAAGTGAAGGTGAAGTTAACAATGCTGAAAATTCAGGGTCTCATGTTGAAGACAGGATTTCTGAGCCTTATGTGGGTATGGAATTTGATTCTGAAGATGCTGCAAAGAGTTTCTATGATGAGTATGCCAGACGTGTGGGTTTCAGCTCCAAAGTTGGTGCACACAGTCATACTAAAGATGACTTTGGAATTGTGTATAGGGAGTTTGTGTGTGGCAGGGAAGGTTTGAAAAGAAGGTATAGTGATAGTTGCGATGCAATGATTAGGTTAGAGcaaaagaatcaaaaatgGGTTGTAACAAAATTTGTGAAGGAGCACAGCCATTCCATGGTGAGTCCTGGTAAGGTGCATCATCTTCGTCCACGCAAGCATTTTTCTAGTGTTGGAAGGACCATGCCTGAAACATATCAAGGAGTGGGACTTGTTCCAAGTGGTGTTATGTATGTATCCATGGATGGTAATCGTCTCTCTACTGAGAATAATTATGGAATCAGGAATACTCCTCCACCACCTCCTCCTCCACCTCCTCCTTCAGCAGATCCAAGTCACCCAATTAAAAATCCTACACCAGTTAAGAATCCCACACCGGTTAAGAATCCTACACTGGTGAATTACACCGTAAGGCCTCCTATTCGAAAGAGGACACTGGGGAGGGATGCTCAGAATCTGCTGGagtattttaagaaaatgcaGGCTGAGAATCCTGGTTTCTTTTATGCAATACAACTTGATGAAGATAGTCGTATGTCTAATGTATTTTGGGCAGATGCAAGGTCGAGGACAGCTTACAGCCATTTTGGTGATACAGTTACTTTGGACACAACTTTCAGAGCAAACCAATACATAGTGCCATTTGCTCCATTTACTGGGGTGAACCATCATGGTCAAagtattttgtttggttgtgCTCTCcttttggatgattctgaGGCCTCTTTTGTGTGGCTCCTTAAGACATTTCTAACAGCAATGAATGATCGCCACCCTGCATCTATAACTACTGATCAAGACAGAGCCCTACAGTCAGCAGTTTCTAAGGTTTTTCCCCAAGGTCGTCATTGTATAAGCAAGTGGCATGTCTTGCGGGAAGGGCAAGAAAAGCTGGCCCATGTATGTCATGCACATCCCAATTTTCAGGTTGAactttataattgtattaaccTGACAGAAACTATTGAGGAGTTTGAGTCATCTTGGAGTTCTATCCTTGATAAATATGAACTCAGAAGACATGATTGGCTTCAGTCATTGTATAACGCACGTGCTCAATGGGTTCCGGCATATTTCCGTGGTTCTTTCTTTGCTGCAATATCTCCTAATCAAGGATTTGATGGTTCGTTTTTTGATGGTTATGTCAACCATCAGACAACATTACCTATGTTCGTTAGGCTGTATGAAAGAGCTCTAGAGAGCTggtttgaaaaagaaaaagaagcagatTTTGAGACCTTCTGCACAACACCAGACTTGAAGACACCTTCTCCCATGGAAAAACAGGCTGCTAATCTTTATACTAgaaaaattttttcaaaatttcaagaagAACTAGTTGAAACTTTTGTTTACACTGCGAATAGAATTGAAGGTGATGCGGCAACTAGCACTTTCAGAGTTGCAAAATTTGAGGATGATAGAAAGGCATATATTGTAACACTAAATTATCCTGAGCTGAGAGCTGACTGTAGTTGCCAAATGTTTGAGTATTCAGGCATTCTCTGTAGGCATGTTTTAACTGTTTTCACTGTGACTAATGTACTTACATTACCATCCCATTACATCTTAAGACGGTGGACAAGAAATGCAAAAAGTGGAGTTGGGTCAGATGAACATCCTGGTGAATCACATGGACTGGAGTCTCTGACATCAAGGTATAACAATCTATGTCGGGAAGGCATTAGATATGCTGAGGAAGGGGCAGTAGCTGTGGACACCTATAATGTTGCAATGAGTGCTCTAAAAGAAGGTGTGAAAAAGGTTGCTGCTGTGAAGAAAAATGTTGCCAAAGTTGCAACACCTAATAACCATGGTGGTGGGACAGTTTATGATGATAAGAAAACCACTCTGTCATCTTCAGATACAACTCCTCTTTTATGGCCACAGCAAGATGAAATTACCAGAAGGTTTAATCTTAATGATGCTGGTGTTCCTGTTCAATCTGTTTCTGATCTGAATTTGCCACGGATGGCCCCAATTTCTCTTCATCGGGATGATGGTCCACCTGAAAATATgGTGGTTCTTCCATGTCTGAAATCAATGACTTGGGTGATGGAGAACAAAAACTCAACTCCAGGAAATAGGGTAGCTGTTATCAATCTAAAGTTGCAAGACTACAGCCGAACTCCCTCGGCAGAATCAGAGGTTAAGTTTCAACTCTCAAGAGTTTCTTTGGAACCAATGTTAAAGTCTATGGCTTACATCAGTGAACAACTCTCAACACCAGCTAATAAGGTTGCCGTAATAAATCTTAAGCTTCAAGACACCGAGACAACTTCTGGCGAGTCTGACGTAAAGTTTCAAGTGTCCAGGGACACATTGGGCGCTATGCTGCGTTCAATGGCCTATATTCGCGAGCAACTTTCTAATGCTAGTGATACACAATCAGAGCCACCATTGAAAAGGCATAGGAAGTA 2702 0.4023 MDIQVINVEDGRDQQAGADDGDAEPSEGEVNNAENSGSHVEDRISEPYVGMEFDSEDAAKSFYDEYARRVGFSSKVGAHSHTKDDFGIVYREFVCGREGLKRRYSDSCDAMIRLEQKNQKWVVTKFVKEHSHSMVSPGKVHHLRPRKHFSSVGRTMPETYQGVGLVPSGVMYVSMDGNRLSTENNYGIRNTPPPPPPPPPPSADPSHPIKNPTPVKNPTPVKNPTLVNYTVRPPIRKRTLGRDAQNLLEYFKKMQAENPGFFYAIQLDEDSRMSNVFWADARSRTAYSHFGDTVTLDTTFRANQYIVPFAPFTGVNHHGQSILFGCALLLDDSEASFVWLLKTFLTAMNDRHPASITTDQDRALQSAVSKVFPQGRHCISKWHVLREGQEKLAHVCHAHPNFQVELYNCINLTETIEEFESSWSSILDKYELRRHDWLQSLYNARAQWVPAYFRGSFFAAISPNQGFDGSFFDGYVNHQTTLPMFVRLYERALESWFEKEKEADFETFCTTPDLKTPSPMEKQAANLYTRKIFSKFQEELVETFVYTANRIEGDAATSTFRVAKFEDDRKAYIVTLNYPELRADCSCQMFEYSGILCRHVLTVFTVTNVLTLPSHYILRRWTRNAKSGVGSDEHPGESHGLESLTSRYNNLCREGIRYAEEGAVAVDTYNVAMSALKEGVKKVAAVKKNVAKVATPNNHGGGTVYDDKKTTLSSSDTTPLLWPQQDEITRRFNLNDAGVPVQSVSDLNLPRMAPISLHRDDGPPENMVVLPCLKSMTWVMENKNSTPGNRVAVINLKLQDYSRTPSAESEVKFQLSRVSLEPMLKSMAYISEQLSTPANKVAVINLKLQDTETTSGESDVKFQVSRDTLGAMLRSMAYIREQLSNASDTQSEPPLKRHRK 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00787 900 Pfam FAR1 DNA-binding domain 61 135 IPR004330 -
Bva12g00787 900 Pfam SWIM zinc finger 578 606 IPR007527 GO:0008270
Bva12g00787 900 PANTHER PROTEIN FAR1-RELATED SEQUENCE 3 35 825 - -
Bva12g00787 900 SUPERFAMILY Formin homology 2 domain (FH2 domain) 192 307 - -
Bva12g00787 900 MobiDBLite consensus disorder prediction 1 44 - -
Bva12g00787 900 ProSiteProfiles Zinc finger SWIM-type profile. 572 608 IPR007527 GO:0008270
Bva12g00787 900 SMART 26again6 583 610 IPR006564 GO:0008270
Bva12g00787 900 MobiDBLite consensus disorder prediction 181 227 - -
Bva12g00787 900 MobiDBLite consensus disorder prediction 189 219 - -
Bva12g00787 900 Pfam MULE transposase domain 294 385 IPR018289 -
Bva12g00787 900 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 35 825 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00787 Bva-Chr12 9140652 9145218 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Bva12g00787 MULE 6.6e-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00787 - - qsu:112033076 1400.96