Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g00756 ATGTCGGATGATGTGCTTATTCATTTCTCGTCCAACTCATCCAACCAGTCGGACCAGTCTCTGCCCACTAAGATTGCAAAGCTTGAAGCTCGCATGGCTGGCAAGGCTTCTTCCATAGCTGCTACTGTTCCGTCCACTCAGCAGCCAACTTTGTCCTCTGCTCCTTCAGTTGGGAAATTCGGAGATGCCGCCGAGGAGTTGGCTGCAGTGTCAAGTTCGAGTGATTCTGATGACGATAATGGTGAGGAGTTCCTAATACAAGCAAACACACACAAGCGTCAAAAGCTTCAAGGAGACGATGAGTCTAATATTTTTGAACATGTTGAGGTTGTTAGTGATGGGAGGCAAGCCAGTTTGATGGAGACCAAAGTTAGCATTGatgtaaataagaaaaaacatgGTCGCGGAAGAGGAAATTCTAGTTCAGGTAGGGGGCGTGGTTCCAGAGTTAATGATCAGAGCAGAACACAAATTTCTCCTCCAACAACATTTTTGGCTTCAAATGGTCAGCTTGAGAAGGATAGCAGACTCAAAGATCAGTTTCATACTGATAATGCTGCATTATTAGAGGAGGAGATTGCATCTTTACGTGCAAAAGTTGTTGCACTGGAGGAGGACTTGCGTAAATCAAAACAAGAGACCTATGATTATCAGAATCTTTGCCGCCAGTTAGAAAAGGAACTGAAGGATCTGAAAGATCTTGAACAGCAAATGAAGCCTAAGAGAACAAAAATAGTATCTGATTTGCTTATATCAGTTTCAAAGGCTGAGAGGCAAGAAGCAAGGCTGAAAGTACGACAAGACTCACTGAGACTTGGAAATGTTGGTGTAATCAGAGCTGGAACTGTAATATCTGAGACCTGGGAAGATGGGCAAGCATTAAAGGATCTTAATAGCCAGCTGAGACAACTGATAGAAACAAAGGAGGCTATTGAGCGGCAGCGcaaattattgaagaaaaaacaatctGATAAGGGAGATGGAACTGATGCTGAGAATGGATTACAAGAAGATGATGTCACTATTCAGGATGAAATTTATAAGTCTCGGATAGCTAGTATTAAGCGAgaagaagaaattattttgcgAGAGAGGGATCGCTATGAACTAGAAAAGGGAAGGCTAATACGAGAAATGAAACGTATACGAGACGAGGATGGATCAAGATTTAACAACTTTCAGATTCTGAATCATCGTTACGCCCTTTTAAACCTTCTTGGAAAGGGGGGATTCAGTGAGGTTTACAAGGCTTTTGACTTGGTGGATCATAAATATGTTGCATGCAAGCTTCATGGTTTAAATGCTCAATGGAGTGAAGAGAAGAAGCAAAGTTATATACGGCATGCACTTCGGGAATACAATATTCACAAGACCCTGGTGCATCATCACATTGTTCGTTTATGGGATATCTTTGAGATTGATCAAAATACTTTTTGCACTGTTCTAGAGTATTGTAGTGGAAAGGATCTTGATGCTGTCCTTAAAGCAACACCCATATTGCCTGAGAGGGAGGCTAAAGTCATTCTGGTTCAGATTTTTCAAGGCCTTGTTTACTTGAATAAAAGAACGCAGAAGATTATCCATTATGACCTAAAGCCTGGAAATGTTTTGTTTGATGAACTTGGTGTTGCCAAAGTAACCGATTTTGGTCTTAGCAAGATAGTGGAGGATGACGTGGGATCCCGGGGTATGGAACTTACATCCCAAGGAGCTGGAACGTACTGGTACTTGCCTCCTGAATGCTTTGAGCTCAGTAAAACACCTCTTATATCATCAAAGGTTGATGTCTGGTCTGCCGGCATTCTGTTCTATCAAATGCTATTTGGCAAACGTCCATTTGGGCATGACCAAACCCAGGAGCGGATACTTCGCGAGGACACAATTATAAAGGCACGCAAGGTTGAATTCCCTTCTAGGCCTTCAGTTTCTAATGAGGCAAAGGATTTTATTCGCCGGTGTCTAACATATAACCAGGCCGAGAGACCAGATGTATTAACCATTGCTCAAGATCCATATCTCACATACTCAAAGAGATG 2036 0.4136 MSDDVLIHFSSNSSNQSDQSLPTKIAKLEARMAGKASSIAATVPSTQQPTLSSAPSVGKFGDAAEELAAVSSSSDSDDDNGEEFLIQANTHKRQKLQGDDESNIFEHVEVVSDGRQASLMETKVSIDVNKKKHGRGRGNSSSGRGRGSRVNDQSRTQISPPTTFLASNGQLEKDSRLKDQFHTDNAALLEEEIASLRAKVVALEEDLRKSKQETYDYQNLCRQLEKELKDLKDLEQQMKPKRTKIVSDLLISVSKAERQEARLKVRQDSLRLGNVGVIRAGTVISETWEDGQALKDLNSQLRQLIETKEAIERQRKLLKKKQSDKGDGTDAENGLQEDDVTIQDEIYKSRIASIKREEEIILRERDRYELEKGRLIREMKRIRDEDGSRFNNFQILNHRYALLNLLGKGGFSEVYKAFDLVDHKYVACKLHGLNAQWSEEKKQSYIRHALREYNIHKTLVHHHIVRLWDIFEIDQNTFCTVLEYCSGKDLDAVLKATPILPEREAKVILVQIFQGLVYLNKRTQKIIHYDLKPGNVLFDELGVAKVTDFGLSKIVEDDVGSRGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGKRPFGHDQTQERILREDTIIKARKVEFPSRPSVSNEAKDFIRRCLTYNQAERPDVLTIAQDPYLTYSKR 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g00756 678 MobiDBLite consensus disorder prediction 122 171 - -
Bva12g00756 678 MobiDBLite consensus disorder prediction 141 170 - -
Bva12g00756 678 MobiDBLite consensus disorder prediction 39 55 - -
Bva12g00756 678 ProSiteProfiles Protein kinase domain profile. 400 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00756 678 SMART serkin_6 400 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g00756 678 MobiDBLite consensus disorder prediction 1 22 - -
Bva12g00756 678 SUPERFAMILY Protein kinase-like (PK-like) 392 674 IPR011009 -
Bva12g00756 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 526 538 IPR008271 GO:0004672|GO:0006468
Bva12g00756 678 PANTHER MIXED LINEAGE PROTEIN KINASE 1 678 - -
Bva12g00756 678 Coils Coil 294 324 - -
Bva12g00756 678 CDD STKc_TLK 399 672 - -
Bva12g00756 678 ProSitePatterns Protein kinases ATP-binding region signature. 406 429 IPR017441 GO:0005524
Bva12g00756 678 MobiDBLite consensus disorder prediction 39 59 - -
Bva12g00756 678 Coils Coil 351 385 - -
Bva12g00756 678 Gene3D Transferase(Phosphotransferase) domain 1 391 678 - -
Bva12g00756 678 PANTHER BNAC09G36930D PROTEIN 1 678 - -
Bva12g00756 678 Coils Coil 186 237 - -
Bva12g00756 678 Pfam Protein kinase domain 401 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g00756 Bva-Chr12 8980928 8989402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g00756 383 678 MAP Kinase Kinase Kinase AT3G13530 28.428 1.43e-29 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TLK Bva12g00756 Pkinase 9.6e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g00756 K08864 - gmx:100805168 1082.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g00756 12 8980928 8989402 Bva12g00756 12 8980928 8989402 ECH